| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0648 |
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| Symbol | |
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| ID | 7973226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 707084 |
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| End bp | 708679 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791253 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002942574 |
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| Protein GI | 239813664 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC CCCGTTCCCG AACCGACGAT GTCTTGCTCG TCGGCAGCGG CATCAACTCC
CTGGTCTGTG CCGCGCTGCT CGCGCGCGAC GGCCGCCGCG TTCGCGTGCT GGAGCGCGAA
ACCGAGCTCG GCGGCTGCAT CCGCACCGAC GAGTTGACCC TGCCCGGCCT GCGCCACGAC
ACCTTGTCCA CGGCCCACCC GATGTTCCTG GCGGGACCAG CCTACGCCGC GCTCGGCAAG
GCTTTGCACG CGGCCGGCCT GCAGTACTGC AACACCGATT CGCCCACCGG TGTGCTCACG
CCTGATGGCC GCCACCTGGT GCTCGCGCGG TCGCGCGAAC TCAACGTGCA GCGCTTTGCG
GCCCTGCGCC CGGGCGACGG CGCGGCCTAT GCCGCCGCGC TCGACGAGGT GGGCGCGCAG
GCCCCGCTGC TGTTTTCGCT GCTGGGCAAT GAACTCTGGC GCTTGGGCAC CGCGAAGACC
CTGGCCGGCG CCGCCTGGAA ACAAGGCCCG CACGCGCTCG CGGGCTTCTT TGGCGAGGCG
CTCACGCCCG CGCGGCCCTG GCTCGAACAG CGGTTCCAGA GCGATCTGGT GGGTGCGCTG
CTCGCGCCCT GGGTGCTGCA CTGCGGCCTG GGGCCCGACG CGCCGCTGTC GGCGCTCATG
GCCCAGGTCG TGGCCTTCAC ACTCGAGGCC GTGGGCATGC CCATGGTGCA GGGCGGCAAC
GCCAACACCG TGCGCGCCTT CGAGACGCTG ATCCGCGAGG CCGGCGGCGA ACTGGAAACC
GGTTGCGACG TGGCCCGCGT GCTGGTGGAG AACGGCAAGG CCGTGGGCGC GCGCCTGGTG
GACGGCCGCG AGTACCGCGC CAAGGACGTG GTCTGCAACG TCACACCCAC CCAGCTCTAT
CAGCGCCTGC TTGACCCCAC GCAAGTGCCC GCCCCGCTCG CTACGCAGGC GCGCCAGTGG
CGCTACGGCA AGGGAAACAT GCAGATCCAC CTGGCGCTGT CCGAAGCGCC GCGCTGGCCC
GACGCCTCGC TTGACAGCGT GGGCTACCTG CACCTCACGA GCGGCGCCGA TGCGATCTCG
CGCGCGGTCA ACGAGGCCGA GCGTGGCCTG CTGCCCGCCG AGCCCACGAT CTGCGTGGCC
CAGCCCACGG CGCTGGACCC GAGCCGCGCG CCCGCGGGCA AACACATCCT GTGGGTCCAG
CTGCCCGAAT GCCCGCGCGA GCCCGTAGGC GATGCGGCCG GCCTGATCGA AGTGCCCGCG
GGCCGCCGCT GGACGCCCGC GCTGCGCGAA GCCTATGCCG ATCGCATCAT CGAGCGCCTG
GCTCGCCAGA TCCCCAACCT CAAGGCGAGC CTGCTCGCGC GCGCCGTGAT CTCACCCACC
GACCTCGAGG CGATGAACAT CAACCTGGTG GGCGGCGACC CCTACGGCGG CGACTGCAGC
CTGGACCAGT ACTTCCTCTG GCGCCCACTG CGCGGCACGC GCAACCACGC AACGCACCTG
GACCACCTCT GGCACATCGG CGCCTCAACG CACCCCGGTC CCGGCCTGGG CGGCGGCTCT
GGCTTCCTGC TCGCGCAATC GCTGGGCGCC GCCTGA
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| Protein sequence | MQNPRSRTDD VLLVGSGINS LVCAALLARD GRRVRVLERE TELGGCIRTD ELTLPGLRHD
TLSTAHPMFL AGPAYAALGK ALHAAGLQYC NTDSPTGVLT PDGRHLVLAR SRELNVQRFA
ALRPGDGAAY AAALDEVGAQ APLLFSLLGN ELWRLGTAKT LAGAAWKQGP HALAGFFGEA
LTPARPWLEQ RFQSDLVGAL LAPWVLHCGL GPDAPLSALM AQVVAFTLEA VGMPMVQGGN
ANTVRAFETL IREAGGELET GCDVARVLVE NGKAVGARLV DGREYRAKDV VCNVTPTQLY
QRLLDPTQVP APLATQARQW RYGKGNMQIH LALSEAPRWP DASLDSVGYL HLTSGADAIS
RAVNEAERGL LPAEPTICVA QPTALDPSRA PAGKHILWVQ LPECPREPVG DAAGLIEVPA
GRRWTPALRE AYADRIIERL ARQIPNLKAS LLARAVISPT DLEAMNINLV GGDPYGGDCS
LDQYFLWRPL RGTRNHATHL DHLWHIGAST HPGPGLGGGS GFLLAQSLGA A
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