| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0647 |
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| Symbol | |
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| ID | 7973632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 706255 |
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| End bp | 707034 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791252 |
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| Product | cyclase family protein |
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| Protein accession | YP_002942573 |
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| Protein GI | 239813663 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1878] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATT CGCTCACCCA ATTAGCACAG GACATCGCCA ACGGCGCCGT GCGCGTCGTC
GACCTCACCC ACACCCTGTC CGACCAGTTC CCCGCGCTGC AATTGCCGCC GCAGTTCGGT
CAGGTCTGGG CCTTCAAGTC CGAGCGCATC TCGCAGTACG ACGACGCCGG CCCGGGCTGG
TACTGGAACA ACTTCTCGTG CGGAGAACAC ACGGGCACGC ACTTCGACGC ACCCATCCAT
TGGGTCAGCG GCAAAGACCA TGCGCAGAAC ACGGTCGACA CCATCGACCC GCGCCAGTTC
ATCGGCCCGG CCGTGGTGGT GGACGCGAGC GCCGAGGTGG CGAAGAACGA CGACTGGCTG
CTCACGGTGG ACTTCCTCAA GGCCTGGGAG CAACAGCACG GCCGCATCCC CGCGGGGGCG
TGGCTGCTGT TCCGCACCGG CTGGGCGAAA CGCATCCACC GGCCCGAGGC TTACGTGAAC
ATGCGCGAAG ACGGCGCCCA CACGCCCGGC CCCACTCAGG AGGCGGTGGA ATGGCTCATC
AAGGAGCGCG ACGTGCGCGG CTTCGGTGTC GAGACCATCA ACACCGACGC CGGCCAGGCC
TTCGCCTGGC CCGTGCCCTA CCCCTGCCAC ACCTTTATGC ACGGCGCCAA CAAGTACGGC
CTGCAGTGCC TGCAGAACCT CGACCAGCTG CCGCCCACGG GCGCGGTGAT CTTCGCCGCG
CCGCTCAAGA TCCATGGCGG CTCGGGCAGC CCGCTGCGCG TGCTCGCGCT CGTGAAGTAA
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| Protein sequence | MADSLTQLAQ DIANGAVRVV DLTHTLSDQF PALQLPPQFG QVWAFKSERI SQYDDAGPGW
YWNNFSCGEH TGTHFDAPIH WVSGKDHAQN TVDTIDPRQF IGPAVVVDAS AEVAKNDDWL
LTVDFLKAWE QQHGRIPAGA WLLFRTGWAK RIHRPEAYVN MREDGAHTPG PTQEAVEWLI
KERDVRGFGV ETINTDAGQA FAWPVPYPCH TFMHGANKYG LQCLQNLDQL PPTGAVIFAA
PLKIHGGSGS PLRVLALVK
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