| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0646 |
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| Symbol | |
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| ID | 7973631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 703960 |
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| End bp | 706218 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791251 |
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| Product | Indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_002942572 |
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| Protein GI | 239813662 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGC GCTCATTTGC CCGGGAAGTG CAGCAACTGC GCGTTCCCGC AGGCACCGAA
TTCCGCGGCG AGGGCATCCT CGCCGTCACC AAGGCTTTGC TCGAATCGGG CGTGAGCTAC
GTCACCGGCT ACCAGGGCTC GCCGATCTCG CACCTCATGG ACGTGCTGGC CGATGCCCAG
CCCATCCTCA AGGAACTCGG CGTGTATTTT GAGCCCGCCG CGAGCGAAGC CGCCGCCGCC
GCGGCGCTCT CCGCCTCGGT GAACTACCCC GTCCGCGGGG CCGTCACCTG GAAGAGCACG
GTGGGCACCA ACGTGGCCGC GGACGCGCTG GCCAACCTGG CCTCCGGCGG TGTCACGGGC
GGCGCGCTGA TCATCGTAGG CGAGGACTAC GGCGAGGGCT CGTCCATCAT GCAGGAGCGC
ACCCACGCGT TCGCGATGAA GTCGCAGATG TGGCTGCTCG ACCCCAAGCC CAACCTTCCC
GCGATCGTGC AGGCGGTGCA CGACGGCTTC GCGCTGTCCG AAGCCACCAA CACGCCCGTG
ATGCTGGAGC TGCGCATCCG CTCCTGCCAC CTGCACGGCA GTTTCACCAC GCGCGAGAAC
CGCCGCCCCG CCTTCACGCT CAAGCAGGCG CTGGAGAACC CCACGCGCGA CGTGAACCGC
ATCGTGCTGC CACCCGCCTC CTTCTTGCAC GAGAAAGAGA AGCTGGAGCA GCGCTGGCCC
GGTGCCGTGA AGTTCATCCA GGAACACCAG CTCAATGAAT TCGTTGAGGG CGACCTCGAC
CACATCGGCG TAATCACGCT CGGTGGCATG AGCAACAACG TGCTGCGCGC GCTTAAGAAC
CTCGAGCAGG CCGACCTGTT CGGCAACACG CGCGTGCCGC TCTACGTCCT CAACGTGGCC
TACCCGCTGG TGGAAGAAGA GGTGATCCGC TTCTGCCAAG GCAAGCGCGC GGTGCTGATG
GTGGAAGAAG GCCAGCCCGA CTACCTCGAG CAGAACCTGC ACACCATCCT GCGCCGCCGC
GGCCTGGACA CGGCCGTGCA CGGCAAGGAC CTGCTGCCCC TGGGCGGCGA CTACACCGTG
GCCGTTCTGC AGAAGGGCCT GCGTGGCTTC CTGGAACGCC ACCACCCGGC GGCCTTCGCC
AAGCCCGTGG CGCTCGCGAT GCCGACGACG ACGGCGCGCA CGGCCACGGC CGCCAGCGAG
GCCATCGCCA CGGCCACCGC AAGTGCCACC ACCCTGGCAC CGAGCGCGCC ACCGGCCCCC
GCGACCGCCC TCGCCGCCCT ACTGCCGCCC CGTCCGCCCG GCCTCTGCGT GGGCTGCCCC
GAGCGGCCCA TCTTCTCCTC GCTCAAGCTC GTCGAGCGCG AGCTCGGCAT GCACCATGTG
TCGGCCGACA TTGGTTGCCA CCTGTTCTCC ATCATGCCGC CCTTCAACCT GGGCGCCACC
ACCATGGGTT ACGGCCTGGG TGGTTCGAGC GCCTCGGCCT TCGCGGCGGG CGCGCAACTG
GGGGCATCCA AGCGCGCGAT CGCCTTCATG GGCGACGGCG GCTTCTGGCA CAACGGCCTG
ACCTCGGGCA TCGCGAACGC GGTGTTCAAC AAGCAGGACA ACGTGTTCGT GATCGTGGAC
AACAACTACT CGGCGGCCAC GGGCGGGCAG GACGTCCCGT CCTCGAGCGC GCTCAACCCC
CACCGGAGCA CCCAGCACCC GATCGAGCGC GCGGTGCGCG GCGTGGGTGT GGACTGGGTG
CGCACACTCA CGCACACCTA CGACGTCAAC GGCATGCGCG CCGCGCTCAA GGAGGCGCTG
AGCACCACCA CGCCCGGCCC CAAGGTGGTG ATCGCGCAGA GCGAGTGCAT GCTCAATCGC
CAGCGCCGCG AGAAGCCCGC TAAGGCCAAG GCCATCAAGG GGGGCGAGCG GGTGCTCAAG
GAACGTTTCG GTGTCGACGC CGCTGTGTGC TCGGGCGACC ACGCCTGCAT GCGCGTCTCG
GGCTGCCCCA GCCTCACGCT CGCGCCCAGC GGCGATGCAC TCAAGCCCGA CCCCGTGGCC
AGCGTGGACG AGCACTGCGT GGCCTGCGGC CACTGCGGCG AAGTCGCCGA CGCTGCCGTG
CTCTGCCCGT CGTTCTACAA GGCTACCAAG GTGCACAACC CGGGCCGCTT CGAACGCTGG
CTCAACCGCA TCCGCCAATT CACCGTGGGC TGGTTGCAGG CGCGCCAGTG GAGGGCGCGC
AGCGAGCGCG CGCTGTTCCC GCTGGAGGCG CTGAAATGA
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| Protein sequence | MAERSFAREV QQLRVPAGTE FRGEGILAVT KALLESGVSY VTGYQGSPIS HLMDVLADAQ
PILKELGVYF EPAASEAAAA AALSASVNYP VRGAVTWKST VGTNVAADAL ANLASGGVTG
GALIIVGEDY GEGSSIMQER THAFAMKSQM WLLDPKPNLP AIVQAVHDGF ALSEATNTPV
MLELRIRSCH LHGSFTTREN RRPAFTLKQA LENPTRDVNR IVLPPASFLH EKEKLEQRWP
GAVKFIQEHQ LNEFVEGDLD HIGVITLGGM SNNVLRALKN LEQADLFGNT RVPLYVLNVA
YPLVEEEVIR FCQGKRAVLM VEEGQPDYLE QNLHTILRRR GLDTAVHGKD LLPLGGDYTV
AVLQKGLRGF LERHHPAAFA KPVALAMPTT TARTATAASE AIATATASAT TLAPSAPPAP
ATALAALLPP RPPGLCVGCP ERPIFSSLKL VERELGMHHV SADIGCHLFS IMPPFNLGAT
TMGYGLGGSS ASAFAAGAQL GASKRAIAFM GDGGFWHNGL TSGIANAVFN KQDNVFVIVD
NNYSAATGGQ DVPSSSALNP HRSTQHPIER AVRGVGVDWV RTLTHTYDVN GMRAALKEAL
STTTPGPKVV IAQSECMLNR QRREKPAKAK AIKGGERVLK ERFGVDAAVC SGDHACMRVS
GCPSLTLAPS GDALKPDPVA SVDEHCVACG HCGEVADAAV LCPSFYKATK VHNPGRFERW
LNRIRQFTVG WLQARQWRAR SERALFPLEA LK
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