| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0639 |
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| Symbol | |
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| ID | 7973624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 695746 |
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| End bp | 696798 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791246 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002942567 |
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| Protein GI | 239813657 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCCG ACATTGCCCC CCCGTTGCCC TCGCCCCCGG CGGCGCCTCC GACCGGGCTG
GACCTGAGTC CGGTGTACCG TCATTGCGTG TTCCGCTCGG CTGTGCCTAG CCGGTCACAC
CAGGTGCTGA CCGATTCCCT GATCGATCAC GAGGTGCAGT GGGGCCGCGG CAGCGTGGAT
GCGGCCATGT TCCGCGCCGA CACGCCCCGA CTGCAGGTCA TGGTGCTGCG CTATGGCTCC
GAGGTCGAGG TCAAGCCCCG ACCCTTCGAA GGCTTTAGCC TGGTGCAGAT GCCCCTGCGC
GGCACGATGT CCGTGGAGTC CGGCGGCGAG CGGCTTGAGG TGGGGCCAGG CCAGGTCGCG
GTGCTGCCCT CGGACCGGCA GTTCAAGCTC GCCTGGAGCG AGGCGTGCGA GCAGATCATC
GTTCGCATGC CGCACGCCCT TATGCGCGGC GGGGTGTCGC AACTCAAGGG CTTTGGCAAC
GCGCCCGGCG CGCAGCCGGG CTACCTGCTT GACGGCAGCG CCGCGCGCCA GTGGGCCGCG
CTGCTGCAAT CGCTGCTGGC CACGGTGCCG GGGCAGGACG GCGTATCGCC GCTGCGCGAC
CCCGCCTGGG TTCACCACAT GGAGGACGGC ATGGCGCTGT TCACCCTGCT GCACCTGCGC
CGTTGGGTCG AACAATTGCT GGCCACATCG CCAGCGGGCA AGGCCGGCGT CCGTTCGCTG
CTCGGGACCT CAGAGCGTTT GCAGGCCGCC GAACGCTGGG TCAGCACCCG GCTGTGCGCG
CCGCTGGCCC TGGAGGACCT GGCCCGCGCG GCCGGTGTAA GCGCCCGCAC CTTCTACATG
GAGTGCATGC GCCAGACGGG CGTGGGCCCC ATGACCTGGC TGCGTGACCT GCGCCTGGAC
GCGGCGCGGC GCAAGCTGCT CGAGCGCACG GACCGAAGCG TCACCGACGT GGCCGGTGAC
TGTGGCTTCG GGCACCTGGG GCGTTTCTCG GCCTACTACC AGCGCCGCTT CGGCGAACTG
CCGCGCGAGA CCCTGTCGCG CGGGGGCCGC TAG
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| Protein sequence | MHADIAPPLP SPPAAPPTGL DLSPVYRHCV FRSAVPSRSH QVLTDSLIDH EVQWGRGSVD
AAMFRADTPR LQVMVLRYGS EVEVKPRPFE GFSLVQMPLR GTMSVESGGE RLEVGPGQVA
VLPSDRQFKL AWSEACEQII VRMPHALMRG GVSQLKGFGN APGAQPGYLL DGSAARQWAA
LLQSLLATVP GQDGVSPLRD PAWVHHMEDG MALFTLLHLR RWVEQLLATS PAGKAGVRSL
LGTSERLQAA ERWVSTRLCA PLALEDLARA AGVSARTFYM ECMRQTGVGP MTWLRDLRLD
AARRKLLERT DRSVTDVAGD CGFGHLGRFS AYYQRRFGEL PRETLSRGGR
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