| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0635 |
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| Symbol | |
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| ID | 7973620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 691759 |
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| End bp | 692679 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791242 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002942563 |
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| Protein GI | 239813653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCCA CTCTCATTGC CGAGCAGCTG CTCAATGGCC TGGGTTACGG GCTGATGCTG
TTCCTTCTCG CCGCCGGCCT CACCCTGGTC TTCGGGGTGA TGGACACCAT GAACCTGGCG
CATGGTTCAC TGTTCACGAT GGGCGCCTAC ATCGGCGCCA CCCTCTCGCT CTACACCGGA
TCCTTCGTAC TGGCCGTGGC CGGCGCGGTT GTGGGCACGG TGCTGCTGGC GCTGGCGCTC
GAGATCGCGC TGATGCGGCG CCTGTACGTG TCCAACCACT TGGTCCAGGT GGTCGCCACG
CTGGGCGTGA TCCTCATCGT CGACGACGTC GTCAAGGCGA CCTGGGGCGC CGCGCCCATC
ATCGCGGGCG CGCCCCAGGT CTTCAGCCAG CCGATCCAGA TCACGAGCGA CTGGGCCTAC
CCTTCGTACC GCGTGCTGGT GCTGGTGGCG GGACTGGCAG TCGCCGCGCT GCTCTATGCC
CTGGTGAACC ACACGCGGCT GGGCATGCTG GTGCGCGCGG GCGCCTCGAA CCGCGCCATG
GCGCAGATGA TGGGCGTTCG CGTCAAGCAG GTGTTCTCGG TGATCTTCCT GCTCGGCGCC
GCGCTCGCGG GCCTGGCCGG TGCGCTGATG GGCCCGCTGT CGGCGGTGCA GAACGGCATG
GGCGAGACGA TCATGATCCC GGCGCTCATC GTCATCGTCA TCGGTGGCAT CGGCTCGGTG
CGCGGCGCGC TCGTAGGCGC CTTGCTGGTG GGCACCGTCG AGACCATCGG GCGCGCCTTC
GCGCCCGCGC TGCTCAAGCA GTTCATGCCA CCTGCTCTGG TGGCCGACAC CGCACCAGCT
CTCGCGGGCA TGACCATGTA CCTGCTGATG GTGGCAGTGC TCTTCTTCAA ACCCCGCGGC
CTGTTCCCGG CCCGCGGCTG A
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| Protein sequence | MSSTLIAEQL LNGLGYGLML FLLAAGLTLV FGVMDTMNLA HGSLFTMGAY IGATLSLYTG
SFVLAVAGAV VGTVLLALAL EIALMRRLYV SNHLVQVVAT LGVILIVDDV VKATWGAAPI
IAGAPQVFSQ PIQITSDWAY PSYRVLVLVA GLAVAALLYA LVNHTRLGML VRAGASNRAM
AQMMGVRVKQ VFSVIFLLGA ALAGLAGALM GPLSAVQNGM GETIMIPALI VIVIGGIGSV
RGALVGALLV GTVETIGRAF APALLKQFMP PALVADTAPA LAGMTMYLLM VAVLFFKPRG
LFPARG
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