Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0630 |
Symbol | |
ID | 7973615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 686851 |
End bp | 687912 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791237 |
Product | Rieske (2Fe-2S) domain protein |
Protein accession | YP_002942558 |
Protein GI | 239813648 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.494266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCG ACGCCTCTCC CTCTCCCTAT GTGCACAACG CCTGGTACGT CGCGGCCTGG GCGAAGGACC TCGTGCACGC GATGCGCGCG ATCACCATCA TGGACCGGCC CGTGCTGCTG TACCGTACCG AGGACGGACG ACCGATCGCG CTGGAGGACC GCTGCTGTCA CCGGCGTGTC CCGCTGTCGC GCGGAACCCT GATCGGCGAC ACCGTGCAGT GCGGCTACCA CGGCTTCACC TTCGATTGTT CGGGCCAGTG CATCGCCATT CCTAACCAGG AGCAGATCCC GCCGCGTGCG CGCGTGAAGG GCTACCCCGT ATGCGAGATG CACCACCTGG TCTGGATCTG GATGGGCGAC CCGGCCCGGG CCGACGAAGC GCTGGTGCCG GACTTCTCGG TGCTGAGCGA CCCGCGCCAT GCGTGGGAGC GCGACTACAT GCACGCCAAG GGCAACTACC GGCTTATCGT TGACAACCTG AACGACCTGA GCCACCTGAG CTTCGTGCAC AGCTCCACCA TCGGCAACGC GGCCACAGCG CTCGCGGAGC TGGAGGTCAG CGACGGCGAG CAGGGCGTCA CCCAGACGCG ATGGATGATC AACACGCCGC CGCCGCCCAC GTACCAGCGA CTCGCGGGCT TCGAGGGCCC CATCGACCGC TGGCAGGTCA TCGCCTTCCT GCCGCCGACG ACGGTGCGCA TCCGCACCGG CGGGCGCGCG CGCAGTAACG GCGAGCGCAA CTTCGACGGC GACGATACCA TCGGCATGGT CGCGCTGCAC GCCATCACGC CCGAGACGGC CACCACCAGC CACTACTTCT GGGCGCAGAC GCACGACTTC CGCACCGATG AACCCGCGGT GACGCAGAGC CTGTTCCAGG AAATCAAGAA GGCCTTCCAC GAAGACCTCG AAATCTTCGC GCTGCAGCAG GCCGCGATCC AGAACGACCC CAACGGCGAG GAGATTAGCT GCCGTGCCGA TCGCGCACAG ATCGCCGTGC GCCGGCACAT TCAGCGCCTG CTGCAACAGG AGAACAGCGG CGCGCTCGCC AGGGAAGGCT GA
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Protein sequence | MNTDASPSPY VHNAWYVAAW AKDLVHAMRA ITIMDRPVLL YRTEDGRPIA LEDRCCHRRV PLSRGTLIGD TVQCGYHGFT FDCSGQCIAI PNQEQIPPRA RVKGYPVCEM HHLVWIWMGD PARADEALVP DFSVLSDPRH AWERDYMHAK GNYRLIVDNL NDLSHLSFVH SSTIGNAATA LAELEVSDGE QGVTQTRWMI NTPPPPTYQR LAGFEGPIDR WQVIAFLPPT TVRIRTGGRA RSNGERNFDG DDTIGMVALH AITPETATTS HYFWAQTHDF RTDEPAVTQS LFQEIKKAFH EDLEIFALQQ AAIQNDPNGE EISCRADRAQ IAVRRHIQRL LQQENSGALA REG
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