| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0628 |
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| Symbol | |
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| ID | 7973613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 684364 |
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| End bp | 685323 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791235 |
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| Product | ferredoxin |
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| Protein accession | YP_002942556 |
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| Protein GI | 239813646 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.544899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCCA CGCTTGCCCT TCACGTCCGG CACATCGAGA CCCTGACCCC GCGGGTGCGA
AAACTCGTGC TGGGCCTGGC CGATGACGCC CCTCCGCCCG CTTACGAGCC CGGCGCCCAC
ATCGAACTGC ATGTGCCCGG CACGGCCAAC GCAGGCCCCT TGCACCGCGC GTATTCGCTG
GTGCGGCCCT CGGCCGGCTC GAACACGCTG GAAATCGCCG TGCAGATCGA AGAAAACGGC
AGCGGCGGCT CGCGCTGGGT GCACAGCCTG CAAAGCGGCG ACACACTCAC CGCCAACCCG
CCCCGCAATC TCTTTCCCCT GCAGGGCCAA CAGCAGCGGC CGCTGCTGCT GGCCGCAGGC
ATCGGCATCA CGCCCATCCT GTGTATGGCG CTCGAGCTCG ACCGCCAGGG CCTGGCCCAC
GAAATGCACT ACGTGGCGCG CAGCCGCGAG CTCGCCGCCT ACGCGGGCGA GGTCGAGGCG
CTGGCGGGCG CCACCTGCTG GTTCGACGAA GGCGACCCCT CGCGCGGCAT TCCCCTGCCC
ACGGTGATCG GCCCGCCCAT CGCCGAGCGG CACCTGCACG TCTGCGGCCC CAAGCCCTTC
ATCGCCGCGG TGCTCGACAC CGCGCGCCAA CTCGGCTGGC CGGAAAAACA GCTGCACTGC
GAGTTGTTCA CCGGCGCGCT GGCGGCGCAA GGCGACCGCG CCTTCGAGGT CGAACTCAAG
GACTCGGGGC TCACGCTGTC GGTGGCGGCC GACCAGACCA TCCTGGAGGC TATGGAAAGT
GCCGGCCTGG ACCCGCTGTT CGACTGCCGC CGGGGCGACT GTGGCATCTG CGTGGCGCGT
GTGCTCGGCG GCGACGCCGA CCACCGCGAC ATCTGTCTGT CGGCGCGCGA GCACGAGGCC
GGCAACTTCT GCATCTGCGT CTCGCGCGCG CGCGGCGAGC GCCTGGTGCT GGCCCTTTGA
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| Protein sequence | MESTLALHVR HIETLTPRVR KLVLGLADDA PPPAYEPGAH IELHVPGTAN AGPLHRAYSL
VRPSAGSNTL EIAVQIEENG SGGSRWVHSL QSGDTLTANP PRNLFPLQGQ QQRPLLLAAG
IGITPILCMA LELDRQGLAH EMHYVARSRE LAAYAGEVEA LAGATCWFDE GDPSRGIPLP
TVIGPPIAER HLHVCGPKPF IAAVLDTARQ LGWPEKQLHC ELFTGALAAQ GDRAFEVELK
DSGLTLSVAA DQTILEAMES AGLDPLFDCR RGDCGICVAR VLGGDADHRD ICLSAREHEA
GNFCICVSRA RGERLVLAL
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