| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0617 |
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| Symbol | |
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| ID | 7973602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 674717 |
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| End bp | 675112 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644791224 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_002942545 |
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| Protein GI | 239813635 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA ATATCACCTC TCCTTTGCTG GCCAAGCCCA ACGGCCACTT CTCTCAAGCT
ACCGCCATCG AGGCCCAGGG CCGCCTGGTC TTCATTTCCG GCATGACCGC CCGCGCCCAG
GACGGCACCG TGGCGGGCAT CGGCGATGTG TCGGTGCAGA CGCGCCAGGT GTGCGAGAAC
CTCAAAGCCG CTGTCGAGGC CGCCGGCGGC ACGCTGAGCG ACATCTGCCG GGTGGACGTG
TATGTGCGCA ACATTGAGCA CTTCAGCGCC ATCCACAAGG TGCGCAGCGA GTACTTCGCC
AATCCGCTGC CCGCCTCCAC CATGGTCGAG GTGGCCAAGA TGGTGTCACC CGACTACCTG
ATCGAGATCA GTGCCATCGC GGTCATCCCG GCATGA
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| Protein sequence | MKTNITSPLL AKPNGHFSQA TAIEAQGRLV FISGMTARAQ DGTVAGIGDV SVQTRQVCEN
LKAAVEAAGG TLSDICRVDV YVRNIEHFSA IHKVRSEYFA NPLPASTMVE VAKMVSPDYL
IEISAIAVIP A
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