| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0608 |
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| Symbol | |
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| ID | 7973593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 665224 |
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| End bp | 665709 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644791216 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002942537 |
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| Protein GI | 239813627 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGAG CGGCTGCTTG GGCTGGCGGG CTGACGCGCG AGCAACTTGA GCGCGTCGAA
CTGGAACCGC AGGATCGCTT CTATTCGGCT GGTGAGATAG GCTGCCACAA AGTAAGCGCG
GCGACGCACT GGATCGGAAT CGTCGAAGGG ATGGTCAAAG TGGAGGTCCT GTCGGCGGAT
GGCCGAAGCA CCACACTGAC CGGGGTCACC AATGGAGGTT GGCTCGGGGA GGGTTCCGTG
CTGAAGGGGG AGTTGCGTCC CTATGTTGTT GTCGCGTTGC GCGACACCCG CATTGCGTTG
ATGCCGAGCC AGACCTTTCA CTGCTTGGTC GCCAACAGCT TGGGCTTCTG CCATTTCATG
ATCGATCAGC TCAATGCAAG GCTCGGTCAG TTCATTGCGC AAGCCGAGAG CTTTCGGATG
CACGACATCA GTTCGCGTGT GGCGGGCTGC ATGGCTGAAC TCTTCAATCC TCAACTCAAT
CCCTAG
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| Protein sequence | MLRAAAWAGG LTREQLERVE LEPQDRFYSA GEIGCHKVSA ATHWIGIVEG MVKVEVLSAD
GRSTTLTGVT NGGWLGEGSV LKGELRPYVV VALRDTRIAL MPSQTFHCLV ANSLGFCHFM
IDQLNARLGQ FIAQAESFRM HDISSRVAGC MAELFNPQLN P
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