| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0593 |
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| Symbol | |
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| ID | 7973577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 652124 |
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| End bp | 654454 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791200 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002942522 |
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| Protein GI | 239813612 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.729726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGCA AGCCGCGCAG CGGCGCAGCG GCCACGCCCG CCGCCCGCCG CGCGCGCGCG
CTGCGCTGGG CCGTGGGCGT GGGCGCCGCG CTGGTCACGG CCATCGGCCT GGTGCTGATG
TTCCTGCTGG CCCAGGCCAC CAACAACCGC GCGCTGTACG AGCGCTACTA CGTGCGGCTG
TTCGGCATCA ACGTGGTGGT GGCGGTGCTG CTGGTGCTGG TGATCGGCTG GGTCGCCTTC
CGGCTGCTGC GGCGGCTGCG CCAGGGCAAG TTCGGCAGCC GCCTGCTCAT CAAGCTGGCG
GCCATCTTCG CGCTGGTGGG CGTGGTGCCG GGCGCGCTGG TCTACGTGGT GTCCTACCAG
TTCGTCGCGC GCTCGATCGA AAGCTGGTTC GACGTCAAGG TGGAGGGCGC GCTCGACGCC
GGCCTGAACC TCGGCCGCGC CACGCTTGAC TCGCTCGCGG ACGACCTGGC CGCCAAGACG
CGCGTGGCCA GCGCCCAGCT GGTGCAGGTG CCCGACGCAA GCGCCGGCCT TGTCCTCGAG
CGCATCCGCG ACCAGCTCCA GGCCAGCGAC GTGGTGCTCT GGACCGGCAC CGGCCAGCTG
GTGGCCGGCG CCGGCGCCTC GCGCTTCCAG CTCAACCCCG AGCGGCCGAC CACCCAGCAG
CTGCGGCAGG TGCGCGCCGA CCGCGCCATC GCCCACATCG AGGGCCTGGA CGAAACCGCG
GCGCCGGGCG CCAACGTGCC GCCTGCCAGC GTGCGCGCCC TCGCGATGGT GCAGCGGCCG
GGCTTCGATT TCGATACCGC ACCGCGCTTC CTGCAGGTCA CGCAGCCGCT GCCGCCCGCG
GTGGTGGCCA ACGCACTCGC CGTGCAGGAA GCCAACCGCG AATACCAGGA GCGGGCCTTG
GCCCGCGAGG GCCTGCGGCG CATGTACATC GGCACCCTCA CGCTGAGCCT TTTCCTGGCC
GTGTTCGGCG CCGTGCTGCT GGCCGTGCTG TTCGGCAACC AGCTCGCGCG GCCGCTGCTC
GTGCTGGCGG ACGGCGTGCG CCAGGTGGCC GGCGGCGACC TGCGGCCGAC CGCCGTGCTG
CAGGGCAAGG ACGAGCTGGG CGGCCTCACG CGCTCCTTCG CCGTCATGAC CCAGCAACTG
GCCGATGCCC GCGGCGCCGT CGAAAAGACC ATGGGCCAGC TCGACGCCGC CCGCGCCAAC
CTGCAGACCA TCCTGGACAA CCTGACCTCC GGCGTGATCG TGCTCGACGC CAAGGGCACC
ATCCTTTCCA CCAACCCCGG CGCCACCCGC GTGCTGCGCG CGCCGCTGGC GGCCTACGAG
GGCATGCCGC TCGCCCAGGT GCCCGGGCTC GCGGACTTCG GCAACAGCGT GCAGCAGCAG
TTCGACGAAT TCCAGGTCGA GCGCCTGCAG CACGGCCTGG ACCACTGGCA GCACGCCTTC
GAGCTGCATG CCAGCGGCAC CGACCTGCCG CAGCAGGACA GCGCCATCAA CATCGTGGCG
CGCGGCGCCG AGCTGCCGGG GGCCGCGCGG CTGCTGGTGT TCGACGACAT CTCCGAAATC
GTCTCCGCCC AGCGCGCCCA GGCCTGGGGC GAAGTGGCGC GACGCCTGGC CCACGAGATC
AAGAACCCGC TCACGCCCAT CCAGCTCTCG GCCGAGCGGC TCGAAATGAA GCTCTCGGGC
AAGGTCGCGC CGCCCGAGCA GGCCGTGCTC GTCAAGTCGG TCAAGACCAT CGTCGACCAG
GTCGACGCCA TGAAGCGGCT GGTCAACGAA TTCCGCGACT ACGCCCGCCT GCCCGCGGCC
GACCTGAAGC CGGTCGACCT CAACGCGCTG CTGGCCGACG TGCTCCAGCT CTACAGCGCC
GAGAACGCGC CCATCGCGCT GCGCTCCGAG CTCGACGAGC GCTGCCCGCC CATCCGCGGC
GACGCCCAGC AGATCCGCCA GGTCATCCAC AACCTGCTGC AGAACGCCCA AGACGCCGCC
GAGGCCGCCG CCAGCACCAC CGGCCGCGCC GGCGAGGTCG TCATCCGCAC CCGCCTGGGC
GATTCGGGCC AGCGCGTGCG CCTCACCGTG CAGGACAGCG GGCCGGGCTT TGCCGAGAAC
ATCCTCAAGC GCGCCTTCGA GCCCTACGTC ACCACGAAAA CAAAAGGTAC AGGTTTGGGA
CTGGCCGTGG TCAAGAAGAT CGCGGACGAG CACGGCGCGC GCATCGAGCT TTCCAACCGC
GTTGTCGATG GGGCTGTAGC AGGGGCGCAA GTCTCGCTAT CATTCGCGCT GGCAGGCGAG
CCGCAAACAG CGGTCGCTCA CACCGAAGAT CCGAAGTCTT CCGCCGCCTG A
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| Protein sequence | MSSKPRSGAA ATPAARRARA LRWAVGVGAA LVTAIGLVLM FLLAQATNNR ALYERYYVRL
FGINVVVAVL LVLVIGWVAF RLLRRLRQGK FGSRLLIKLA AIFALVGVVP GALVYVVSYQ
FVARSIESWF DVKVEGALDA GLNLGRATLD SLADDLAAKT RVASAQLVQV PDASAGLVLE
RIRDQLQASD VVLWTGTGQL VAGAGASRFQ LNPERPTTQQ LRQVRADRAI AHIEGLDETA
APGANVPPAS VRALAMVQRP GFDFDTAPRF LQVTQPLPPA VVANALAVQE ANREYQERAL
AREGLRRMYI GTLTLSLFLA VFGAVLLAVL FGNQLARPLL VLADGVRQVA GGDLRPTAVL
QGKDELGGLT RSFAVMTQQL ADARGAVEKT MGQLDAARAN LQTILDNLTS GVIVLDAKGT
ILSTNPGATR VLRAPLAAYE GMPLAQVPGL ADFGNSVQQQ FDEFQVERLQ HGLDHWQHAF
ELHASGTDLP QQDSAINIVA RGAELPGAAR LLVFDDISEI VSAQRAQAWG EVARRLAHEI
KNPLTPIQLS AERLEMKLSG KVAPPEQAVL VKSVKTIVDQ VDAMKRLVNE FRDYARLPAA
DLKPVDLNAL LADVLQLYSA ENAPIALRSE LDERCPPIRG DAQQIRQVIH NLLQNAQDAA
EAAASTTGRA GEVVIRTRLG DSGQRVRLTV QDSGPGFAEN ILKRAFEPYV TTKTKGTGLG
LAVVKKIADE HGARIELSNR VVDGAVAGAQ VSLSFALAGE PQTAVAHTED PKSSAA
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