Gene Vapar_0592 details

Gene Information

• Locus tag: Vapar_0592
• ID: 7973576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 651480
• End bp: 652127
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644791199
• Product: putative proline rich signal peptide protein
• Protein accession: YP_002942521
• Protein GI: 239813611

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAACG TCCGCGCTGA GGCCCGCAGG CGGCGCATCC TGGCGCCGCT GGCCGGGCTC 
GTGCTGGCCT GGGCATTGCT GCTGACCTGC CTGCTTCCGA TTGCGGTGGC GCAGGGGCGC 
GTCGTGCCAT CGGTCACCCA GATGCGGCTG GAACAGGCCG ACGACGGCGT CTACCTCACC 
GCGGCCGTGC AGTTCGAGCT GCCCTCGCTG GTCGAGGAAG TGCTCGACAA GGGCATTGCC 
ATCTATTTCG TGGCCGAGGC CGAGGTCTTC CAGGAGCGCT GGTACTGGAC CGACCGCAAG 
GTGGCCCAGG TCACGCGCCA CATGCGGCTG GCCTACCAGC CGCTCACGCG CCGCTGGCGG 
CTCAACGTGT CGCCGGTGCC CATCACCGGC ACCGCGGGCT TCGGCGTTTC GCTGAACCAG 
AACTTCGACA GCCTCGCCGA CGCCATGGAT GCCGTCAAGC GGGTCGGCCG GCTGCGGCTG 
GGCGATGCGG CCGAGGTGGG CGACGAGGCG CAGCACCAGG TCGTGTTCCG CTTCCGGCTC 
GACACCTCGC AGCTGCCGCG TCCGTTCCAG ATCGGCGTGG TCGGCCAGGC CGACTGGAAC 
ATCGTGGCCG AGCGCAGCGC CAAGCTCGCG CTGGAGAAGC AGCGGTGA 

 

Protein sequence

MKNVRAEARR RRILAPLAGL VLAWALLLTC LLPIAVAQGR VVPSVTQMRL EQADDGVYLT 
AAVQFELPSL VEEVLDKGIA IYFVAEAEVF QERWYWTDRK VAQVTRHMRL AYQPLTRRWR 
LNVSPVPITG TAGFGVSLNQ NFDSLADAMD AVKRVGRLRL GDAAEVGDEA QHQVVFRFRL 
DTSQLPRPFQ IGVVGQADWN IVAERSAKLA LEKQR