| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0582 |
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| Symbol | secE |
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| ID | 7973566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 637225 |
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| End bp | 637608 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644791189 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_002942511 |
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| Protein GI | 239813601 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCACTT CTCAAATCGA AACCGTGAGC ACGGGTGCCG ACAAGGCCAA ATTGGCCGCG
TCGGTGGTGC TGGCAGTGGG CGCCATCGTG GCGTTCTACC TGCTGGCGCG CCAGGGCTCG
CTGGTGCAAT GGGCTGCGCT GCTGGTCGGC CTGGCCGCGG CCGTGGGCGC CTTCGGCAGC
TCCGAGAATG GCCGCCAGTT GTGGGCTTTC GGCCGCGACT CGTGGCGCGA GGTCAAGAAA
GTCGTCTGGC CGACCCGCAA GGAAGCCATG CAGATGACGG CTTATGTGTT TGCCTTCGTG
GCCGTCATGT CCGTTTTCCT CTGGCTCACC GACAAGACGC TCGAATGGGT GTTTTTCGAC
CTCATTCTGG GCTGGAGAAA ATAA
|
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| Protein sequence | MATSQIETVS TGADKAKLAA SVVLAVGAIV AFYLLARQGS LVQWAALLVG LAAAVGAFGS
SENGRQLWAF GRDSWREVKK VVWPTRKEAM QMTAYVFAFV AVMSVFLWLT DKTLEWVFFD
LILGWRK
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