| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0579 |
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| Symbol | |
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| ID | 7973559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 633745 |
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| End bp | 634545 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791182 |
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| Product | Indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_002942508 |
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| Protein GI | 239813598 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGACA TCCTCGACAA GATCATGGCC GTCAAGCGGC AGGAAATTGC TGCAGCGCAG
AAGAAAAGCC CGCTCGAAGC CGTGCGCTTC GACGCTGAAA GCCGCGTGCT GACGCGCGAT
TTCGAGGGCG CACTGCGCAC CAGGATCGCC GCCGGCCACG CCGCGGTGAT CGCCGAGGTC
AAGAAGGCCA GCCCGAGCAA GGGCGTGCTG CGCGAAGACT TCATCCCGGC CGACATCGCG
CAGAGCTATG CCGAAGGCGA CGGTGAAATC AGCGCGGCCT GCCTCTCCGT GCTGACCGAC
AAGCAGTTCT TCCAGGGCGG CGTCGACTAC CTCAAGCAGG CCCGCGCCTC GTGCGACCTG
CCGGTGCTGC GCAAGGACTT CATCGTCGAT GCCTACCAGG TGTACGAATC GCGCGCGATG
GGCGCCGATG CCGTGCTGTT GATCGCCGCC TGCCTCGACG ACGCGCAGAT GAAGGACTAC
GAAGCCATTG CGCGCGGCCT CGGCATGGCG GTGCTGGTCG AAGTGCACGA CGCGGCCGAA
CTCGAGCGCG CGCTCAAGCT CAAGACGCCG CTCATCGGCG TGAACAACCG CAACCTGCGC
AATTTCGAGG TGTCGATCCA GGCCACCATC GACCTGCTGC CCCGGCTGCC GGCCGACCGG
CTGGCCGTCA CCGAATCGGG CATCGCCACG CGCGAGGACG TCGCAACCTT GCGCGCGGCC
GGCGTCCATG CCTTCCTGGT CGGCGAGGCC TTCATGCGCG CCAAGGAACC CGGCGAGGCG
CTCGCCGCAT TGTTCAAATG A
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| Protein sequence | MPDILDKIMA VKRQEIAAAQ KKSPLEAVRF DAESRVLTRD FEGALRTRIA AGHAAVIAEV
KKASPSKGVL REDFIPADIA QSYAEGDGEI SAACLSVLTD KQFFQGGVDY LKQARASCDL
PVLRKDFIVD AYQVYESRAM GADAVLLIAA CLDDAQMKDY EAIARGLGMA VLVEVHDAAE
LERALKLKTP LIGVNNRNLR NFEVSIQATI DLLPRLPADR LAVTESGIAT REDVATLRAA
GVHAFLVGEA FMRAKEPGEA LAALFK
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