| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0578 |
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| Symbol | trpD |
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| ID | 7973558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 632686 |
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| End bp | 633711 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791181 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_002942507 |
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| Protein GI | 239813597 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCC CCCAGGAAGC GCTCCAGCGC ACCATCGAGC ACCGCGAGGT GTTCCACGAC
GAGATGCTGC ACATCGTGCG GCTCATCATG AGCGGCGAAT GCTCGCCCGT GATGATGGCG
GCGCTGATCA CCGGGCTGCG CGTCAAGAAG GAAACCATCG GCGAGATCAC CGCAGCCGCG
CAGGTGATGC GCGAGGTGTC GACCAAGGTG CCCGTGAAGG ACACCACGCA CTTGGTCGAC
ATCGTGGGCA CCGGCGGCGA CGGCTCGCAC ACCTTCAACA TCTCGACCTG CTCGATGTTC
GTCGCGGCCG CGGCGGGCGC CAAGGTCAGC AAGCACGGCG GGCGCAGCGT GTCGAGCAAA
TCGGGCAGCG CCGACGTGCT GGAGTCGCTG GGCGTCAACA TCAACCTGCA GCCCGAGCAG
ATCGCGCGCT CCATCGAAGA GGTGGGCATC GGCTTCATGT TCGCGCCCAA CCACCATCCG
GCCATGAAGA ACGTCGCTCC CGTGCGCAAG GAGCTCGGCA TCAAGACCAT CTTCAACATC
CTCGGGCCGC TGACCAATCC GGCCGGCGCG CCGAACATCC TGATGGGCGT GTTCCACCCC
GACCTCGTGG GCATCCAGGT GCGCGCATTG CAGCGCCTGG GCACCGAGCA CGCGATGGTG
GTGTATGGCC GCGACGGCAT GGACGAGATC TCGCTCGGCG CCGCCACCAT GGTGGGCGAG
CTCAAGGACG GCGAGATCCG CGAATACGAA CTGCACCCCG AGGACTTCGG CTTTGCGATG
TCGAGCAACC GCGCGCTGCG CGTGGAAACG CCCGAACAGT CGAAGACCAT GCTGCTCGGC
GTGCTCGACA ATCAGGCCGG CCCGGCGCTC GACATCGTGC TGCTCAACGC CGGCGCGGCC
CTGTACGCCG CCAACGTGGC CGATTCGATG GCCGCGGGCA TCGAGCGTGC GCGCGAGGCC
GTGGCATCGG GCGCGGCGCG CGCCAAGCTG GCCGAGCTGG TCAAGGCCTC CACGTCCGCC
GCGTGA
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| Protein sequence | MITPQEALQR TIEHREVFHD EMLHIVRLIM SGECSPVMMA ALITGLRVKK ETIGEITAAA
QVMREVSTKV PVKDTTHLVD IVGTGGDGSH TFNISTCSMF VAAAAGAKVS KHGGRSVSSK
SGSADVLESL GVNINLQPEQ IARSIEEVGI GFMFAPNHHP AMKNVAPVRK ELGIKTIFNI
LGPLTNPAGA PNILMGVFHP DLVGIQVRAL QRLGTEHAMV VYGRDGMDEI SLGAATMVGE
LKDGEIREYE LHPEDFGFAM SSNRALRVET PEQSKTMLLG VLDNQAGPAL DIVLLNAGAA
LYAANVADSM AAGIERAREA VASGAARAKL AELVKASTSA A
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