Gene Vapar_0575 details

Gene Information

• Locus tag: Vapar_0575
• ID: 7973555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 630336
• End bp: 630920
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644791178
• Product: glutamine amidotransferase of anthranilate synthase
• Protein accession: YP_002942504
• Protein GI: 239813594
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0512] Anthranilate/para-aminobenzoate synthases component II
• TIGRFAM ID: [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.539767
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTGC TGATGATCGA CAACTACGAT TCCTTCACCT ACAACATCGT CCAGTACCTG 
GGCGAGCTGG GTGCGGATGT CCAGGTGCAC CGCAACGACG AGATCAGCGT GGCGCAGATC 
GGCGAGCTGA TCGCCTCGGG CGTCACGCGG CTCGTGGTGT CGCCGGGGCC CTGCTCGCCG 
GCGGAAGCGG GTGTGTCGGT GCCGGCCATC AAGGCGTTCG CGGGCAAGCT GCCGATCCTT 
GGCGTGTGCC TGGGCCACCA GGCCATCGGC GCGGCCTTTG GCGGCAAGAT CATTCGCGCG 
CAGCAGCTCA TGCACGGCAA GACCAGCGAG ATCACGACCA CGCAAGAGGG CGTGTTTGCG 
GGGCTGCCCG AGAAGTTCAC CGTCAACCGC TACCACTCGC TCTCGATCGA GCGCGAGAGC 
TGCCCGAAGG TGCTGGCCAT CACCGCCTGG ACCGACGACG GCGAGATCAT GGGCGTGCGG 
CACACCGGCT TTGCACATGA GGTGCGCATC GAGGGCGTGC AGTTCCATCC CGAATCGATC 
CTCACCGAGC ACGGCCACGC GATGCTCAAG AACTTTCTCG ATTGA 

 

Protein sequence

MKLLMIDNYD SFTYNIVQYL GELGADVQVH RNDEISVAQI GELIASGVTR LVVSPGPCSP 
AEAGVSVPAI KAFAGKLPIL GVCLGHQAIG AAFGGKIIRA QQLMHGKTSE ITTTQEGVFA 
GLPEKFTVNR YHSLSIERES CPKVLAITAW TDDGEIMGVR HTGFAHEVRI EGVQFHPESI 
LTEHGHAMLK NFLD