Gene Vapar_0572 details

Gene Information

• Locus tag: Vapar_0572
• ID: 7973552
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 627517
• End bp: 628119
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644791175
• Product: putative lipoprotein transmembrane
• Protein accession: YP_002942501
• Protein GI: 239813591

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCGCTG CCCTTTCGCT CCCGACCCGG TTGTTCTCCC GACTGGCCGT GCTGGCCTGC 
GCCTGGTTCG CGCTCGGCGC CTCGGCCGCG CAGGTCGACG TGGCCGGCGT CAAGCTGAGC 
GACACCCTCG ACCTGCGCGG CAGCACCCTG CAGCTCAACG GCGCGGGGGT GCGCTACAAG 
GCCATCTTCA AGGTGTACGC GGCGGGCCTG TACGTGGAGA AGAAGGTCTC CACGCCCGAG 
GAGGCGCTGG CCGCGCCCGG GCCCAAGCGC GTGGCCATCA CCATGCTGCG CGACATCGAT 
GCCGACGAGC TCGGCAGGTT CTTCACCAAG GGCGTGGAAG AAAACTCGCC CAAGAGCGAA 
ATGGTCAATC TCATCCCGGG GCTGCTGCGC ATGGGCCGGA TGTTCTCCGA CCAGAAGCAG 
CTCAAGGCCG GCGACAGCTT CACCATCGAC TGGCTGCCCG GCACGGGCAC GCTGGTGACG 
GTGCGCGGCG TGCCGCAGCC CGATCCGGTG AAGGAGCCGG CGTTCTTCAA CGCGCTGCTG 
CGCATCTGGC TCGGGCCGGC GCCGGCCGAC TGGAAGCTCA AGGACGCGCT GCTCGGCAAG 
TAG 

 

Protein sequence

MPAALSLPTR LFSRLAVLAC AWFALGASAA QVDVAGVKLS DTLDLRGSTL QLNGAGVRYK 
AIFKVYAAGL YVEKKVSTPE EALAAPGPKR VAITMLRDID ADELGRFFTK GVEENSPKSE 
MVNLIPGLLR MGRMFSDQKQ LKAGDSFTID WLPGTGTLVT VRGVPQPDPV KEPAFFNALL 
RIWLGPAPAD WKLKDALLGK