| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0556 |
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| Symbol | |
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| ID | 7972966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 615810 |
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| End bp | 617141 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791159 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002942485 |
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| Protein GI | 239813575 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.881432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTATC CATTTGGCGG ACGCAGCCAC TACAGCGTCA TCGTCGTCGG CGGCGGCCAG
GCCGGCCTGT CGCTGAGCCA CTGCCTGCAG CAGCGCGGCA TCGACCACCT CGTGATCGAG
AAGCGCAGCC TGGTGCACAG CTGGCGCACG CAGCGCTGGG ATTCGTTCTG CCTGGTCACG
CCCAACTGGC AGTGCCAGCT GCCGGGCTGG GCCTACCGCG GCGGCGATCC GCACGGCTTC
ATGGTCAAGG ACCAGATCAA CGAATGGCTC GCGGGCTTCG TCGCGCAGGT GAAGGCGCCG
GCCATCGAGG GCGTGACCGT CGAGCGCGTG GCGCGCGTGC CAGGCACGGG CGAGCGCGAC
CGCTTCATGG TGCAGACCGA CGCCGGCCTC TACACCGCCG ACCAGGTGGT GGTGGCCTCC
GGCGGCTACC ACCGCCCGAT CGTGCCGCGC CTGGCCGAGA AGCTGCCGCC GCACGTGGTG
CAGTACCACT CGGCGCAGTA CCGCAACCCG GCGCAGTTGC CCGAAGGGGC GGTGCTGGTG
GTGGGTTGCG GCCAGTCGGG TTCGCAGATC GCCGAGGACC TGCACCTGGC CGGGCGCAAG
GTGTACCTTG CCACCGGCGA TGCGCCGCGC TGCGCGCGCT TCTACCGCGG CCGCGAGGTG
GTCGACTGGC TCGCCGACAT GAAGTACTAC GACATGCCCG TGACCGAGCA TCCGCTGCGC
GAGGGCGTGC GCGACAACAC CAACCACTAC GTGACCGGCC GCGACGGCGG GCGCGACATC
GACCTGCGGC GCTTCGCGCT CGAAGGCATG GAGCTGTACG GCCTGCTGAC CGGCCTGGGC
GGCGACGGCA CGCTGGAGTT CCAGCCCAAC CTGCGCGAGC ACCTGGACAG CGCCGACGCC
ACCTACAACC GCATCAACGC GTCGATCGAC AAGTTCATTG CCTCCCGGGG CATCGAGGCG
CCGCCGCCCT CGGTCTACAC GCCGGTGTGG GAGCCGCCCG AGGAGCGCAC GCGCCTGAGC
CTTGCCGAGG CGGGCATCGC GAGCGTGCTC TGGTGCATCG GCTTCTCGCC CGACTTCGAT
TGGGTGGATG CGCCGGTGTT CAACGGCCGC GGCGCGCCGG TGCACCAGCG CGGCGTGACG
GGCGTGCCGG GGCTCTACTT CCTGGGGCTG CCCTGGCTGC ACACCTGGGG ATCGGGCCGC
TTCTCGGGCG TGGCGCGCGA TGCGGAGTTT CTTGCCGAGG CGATCGAGGA GAGAAAGAAG
GCGGCGGCGG CCGGCCGAGC CGATGTGCAG GAGGAGGAAC CGGCCGGCAC CGGGCTGCGC
GCTGCAGCCT GA
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| Protein sequence | MSYPFGGRSH YSVIVVGGGQ AGLSLSHCLQ QRGIDHLVIE KRSLVHSWRT QRWDSFCLVT
PNWQCQLPGW AYRGGDPHGF MVKDQINEWL AGFVAQVKAP AIEGVTVERV ARVPGTGERD
RFMVQTDAGL YTADQVVVAS GGYHRPIVPR LAEKLPPHVV QYHSAQYRNP AQLPEGAVLV
VGCGQSGSQI AEDLHLAGRK VYLATGDAPR CARFYRGREV VDWLADMKYY DMPVTEHPLR
EGVRDNTNHY VTGRDGGRDI DLRRFALEGM ELYGLLTGLG GDGTLEFQPN LREHLDSADA
TYNRINASID KFIASRGIEA PPPSVYTPVW EPPEERTRLS LAEAGIASVL WCIGFSPDFD
WVDAPVFNGR GAPVHQRGVT GVPGLYFLGL PWLHTWGSGR FSGVARDAEF LAEAIEERKK
AAAAGRADVQ EEEPAGTGLR AAA
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