| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0553 |
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| Symbol | |
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| ID | 7972963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 612383 |
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| End bp | 613513 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644791156 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942482 |
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| Protein GI | 239813572 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCG CGTTGTTGCC TGCCCATTTC TTCTGGCTCC TGCTCGCGCT GTGCCTGGCC
GGCTTTGCGC TGCTGTACGC CGCGGTCCAC GACGCGGGCC GCGGTGCGCG CCGCCGCGCG
CTGCGCCGGC GCATTGCCGC ACTCGGCCCG CCGGCGGCCG AAGCCGACGA AGCCGCGATC
GAATCCATGA GGGAGGCCAT GAGGAAAGCC ATGTCGCACG CACGCCAGCT CCTGCGCCAG
CCATCGTGCC AGCAAGCCGC ACCGGTGCCC TGGTTCCTCT TTCTCGGCGA TGCGGCGGCC
AACCTGCCGG GGCTGCTGGC GGCGGCCCAT GCCGAGCACC TGGCACCTTC GGGCAGCGAG
CCTTTCGGCG AACCCTACTG GCGCTGGTGG CTCACCGGCT CGATGACGGC CATCGAGCTG
CACCCGAGCG CCGTCAGCGA CGTGGCCGCG GCGCCGCACA CGCGTGCGCT GTGGCTCCAG
GCGCTCCTCG CACTGGCCGA GCGGCGCGAC CGCGTGCCGA TCAACGGCGT GGTGGCCTGC
GTGGCGGCGA GCGAACTGCT GCACCCGTCC AGCGCAGGCA TGAAGCCGCT GGCCGGCAGG
ATGCGCCGGC TGCTCGACGA GGCCGCGGAC ACCCTGCGCC TGCAGCTGCC GGTCTACCTG
GTCGTGACCG GCCTGGAGCA GCTGGCCGGC TATGCCACGC TGCGCGGTGC GCTGCCGCCC
GAAGTGCTCG CACAGGTGAT CGGCCATCGC CTGGCCGGGC CGGCCGCCCA CGGCGAGACC
GCGGCCGAAC GGCTCGATGC CCTGTTCGAC CCCATGGCGC GCCAGCTGCA TGCGCTGCGC
ATGGCGCTGC TGCGCGAACA GCCGGGCGCA TCGGGCCGGC TCGCGATCCA TGAGTTCATC
GAGGCGCTGC GGGCGCTGCA GCCCGCATTG CGCGAAGTGG CCGAGGCCCT GTTCGAAAGC
CATGGCCGCG GCTCGCGCGG CCCGCGATGG CGCGGCCTCT ATGTGACGGC TGCCGCATCG
GGTGCGGCCG GCGGCGCCTT CGTGACCGAC CTGTTCGAGC GCTTCCTGCC CGCCGACCAG
CCGCTCGCGC GGCCCGGCCG CGCGCCGAAC GCCAGCGCGG CGAAGGCGTG A
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| Protein sequence | MPAALLPAHF FWLLLALCLA GFALLYAAVH DAGRGARRRA LRRRIAALGP PAAEADEAAI
ESMREAMRKA MSHARQLLRQ PSCQQAAPVP WFLFLGDAAA NLPGLLAAAH AEHLAPSGSE
PFGEPYWRWW LTGSMTAIEL HPSAVSDVAA APHTRALWLQ ALLALAERRD RVPINGVVAC
VAASELLHPS SAGMKPLAGR MRRLLDEAAD TLRLQLPVYL VVTGLEQLAG YATLRGALPP
EVLAQVIGHR LAGPAAHGET AAERLDALFD PMARQLHALR MALLREQPGA SGRLAIHEFI
EALRALQPAL REVAEALFES HGRGSRGPRW RGLYVTAAAS GAAGGAFVTD LFERFLPADQ
PLARPGRAPN ASAAKA
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