| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0529 |
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| Symbol | |
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| ID | 7972939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 583372 |
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| End bp | 584706 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791132 |
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| Product | Methyltransferase type 11 |
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| Protein accession | YP_002942458 |
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| Protein GI | 239813548 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA CGCCCGCGCA GCCGGACACG ACGGCGCACG CGGCCGCGCT GGCGCAAGCC
GCGGCCCTGG TCAAGGCGCA GAAGCTGGAG GCGGCGGGCG AATTGCTGGA CCGCCTCCTG
GAGGCCGCGC CGGCCGACCC CGACGCCCTG CACTACCAGG GCCTGCTGCG CCATGCGCAA
GGCCGCAGCA ACGAGAGCAT CGCGTTGATC GGAAGGTCGC TCACGCTGCA ACCCGCGCAA
AGCGGCGCCT GGAACAACCT GGGCAACCTG CTGGTCGAGA CCGGCCGCAT CGACGACGCG
ATGCTCGCCT ACGGCAACAG CGTTTCCTTC GCCAAAGGAG GCGACGAAGG CGCCGATGCG
CTGAGCAACA TCGCATCGCT CGAACGCCGC AAGGGCCACT GGCAAGCCGC CGAGCGCGTG
AGCCGCCAGG CGATCGAACT GCGGCCGGAA TTCAGCGAGG CCTGGTACAA CCTGTCGATC
GCGCTGATGG AGCAGGGGCG CATCCATGAG AGCGTCATCG CCAACAGCCG TGCGGTGCTG
CTGCAGCCGC GCAACCTGAG CGCCCGCTCG CAGGTGATTC GCGCGCTGGA ACTGCTCGGC
GAGCACGATC AGGCCCTTGG CATGTACCGG GAGTGGCTGG CCGAGGATCC AGGCAATCCC
GTGGTCACGC ATCTGCTGGC CGCCTGCGAG GGGCAGGCGC CCGCGCGCGC CAGCGACGGC
TATGTGGAGA CCGTGTTCGA CAGCTACGCC GGAAGCTTCG ACGCCAGCCT GGAGAAGCTG
CACTACCGTG CGCCCGAGCT GGTGGCGCAG GCGGTGCAGC AAATGCATGG CGCGCCGGCC
GCGAGCCTGG CCGTGGTCGA TGCCGGCTGC GGCACCGGGC TCTGCGCCCC GTTGCTGCGG
CCCTGGGCCG CGCACTTGGC CGGCTGCGAC CTGTCGGTCG GCATGCTGCA GCGCGCGGAG
CAGCGCGGCG GCTACGACGT GCTGCACAAG GCCGAGCTCA CCCACTACCT GCACACGCAG
CCCGGCCGCT TCGACCTGGT GATATCGGCT GACACGCTGT GCTACTTCGG CGACCTGCAC
GAGGTGCTGG CGGCGGCCGC GCGCGCGCTG CGTCCGGCGG GCGGGGTGGT GTTCACGGTC
GAGGCCATGC CCGGGGGACA GCACGACTTC AGGCTCGAAG GCAGCGGCCG CTACCGCCAT
GCGGCTGCGC ATGTGGAGGC CTGCCTTGCG GCTGCCGGCT TTGGTGCCGT GCGCATCGAG
CCGATCGTGC CGCGCCGCGA GGCGGGGCAG GACGTGCAGG GGTGGCTGGC CAGCGCAAGG
CTTTCTGCGC ATTGA
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| Protein sequence | MTTTPAQPDT TAHAAALAQA AALVKAQKLE AAGELLDRLL EAAPADPDAL HYQGLLRHAQ
GRSNESIALI GRSLTLQPAQ SGAWNNLGNL LVETGRIDDA MLAYGNSVSF AKGGDEGADA
LSNIASLERR KGHWQAAERV SRQAIELRPE FSEAWYNLSI ALMEQGRIHE SVIANSRAVL
LQPRNLSARS QVIRALELLG EHDQALGMYR EWLAEDPGNP VVTHLLAACE GQAPARASDG
YVETVFDSYA GSFDASLEKL HYRAPELVAQ AVQQMHGAPA ASLAVVDAGC GTGLCAPLLR
PWAAHLAGCD LSVGMLQRAE QRGGYDVLHK AELTHYLHTQ PGRFDLVISA DTLCYFGDLH
EVLAAAARAL RPAGGVVFTV EAMPGGQHDF RLEGSGRYRH AAAHVEACLA AAGFGAVRIE
PIVPRREAGQ DVQGWLASAR LSAH
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