| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0512 |
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| Symbol | |
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| ID | 7972922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 560987 |
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| End bp | 561997 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791115 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_002942441 |
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| Protein GI | 239813531 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.518617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCGCC GCGGCGCCGC AAGCGCCATC CTGATGCTGC TGGCCGGCCT GCCACAAATC
GCCATTGCGC AGCCTGCGCC GCAGCCCGAT GCACCGGTTC GCTTCGGCAT CCTGCCGCTG
GGCGGCGCCT TCGAGTCGCG CAGCGACTGG GACCCGCTGC TGGCCGAATT GAGCCGCGCC
ATCGCCAGGC CCGTGAGCGT GCTGTCGGTC AACTCGTACG AAGCGCTCGA CCAGGCGATC
CGGCGCGACG AGGTCGACAT GGCCTTCCTG TCCGGCAAGA TGGCGCTGGA CGCCGTCACG
CAGCGGCGCA TGAAGGTGGT GGCCCAGGTG GTGCGGCACG ACGGGCTGCC CGGCTACCGG
GCGCTGCTGC TGGCGCGCAA GGCGCCGCCG TTCAACAGCA TGAAGAGCCT GCTCGCGGAG
CCGGAGCGCT GGCGCCTCGC ACGCGGCGAG CGGCAGTCGG TGTCGGGCTT CATCGTGCCG
CAGCTGCAGC TGTTCCTGCC CAACCACATC GCGATGGAGA CGCGCTTCCT GAGCGAGATC
GTCGGCACCC ACCAGACCAC CGCGCTGGCC GTGGCCAACA GCGAAGCCGA CGTGGCCACC
AACAACACCG CCGACTTCGA GCGCTTCAGG CAGCGCTTTC CGGCCGAGGC CGAGCGGCTG
CAGGTGCTGT GGGAGTCGGA GCTCATTCCG CATGCGCAGA TCGTGGTGCG GCGCGAATAT
CCGCCCGAGC TGCGCAGCCG CGTGCAGGCC TTCCTGGTCG GCTACGGCCG CGCGAAGGGG
CCCAAGGGCG ATGCGGAGCG CGTGGTGCTC AAGTCGCTGC ATGACCTGGC CGGCTTCGTG
GCGGCGGACA ACAGCTCGCT GCAGCCTGCC GCCAAGCTGG CCTACCAGCT GGCCAGGCAG
AACGCCATGG GCGCGCAGTG GGTCAACGAT GCGGCGCGGC AGGCGCGGCT CTCGCGCATC
GAAAGCGGGT ACGCGGAACA GACCGCCGTG CTGCGCGACC TGTCTCCCTG A
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| Protein sequence | MVRRGAASAI LMLLAGLPQI AIAQPAPQPD APVRFGILPL GGAFESRSDW DPLLAELSRA
IARPVSVLSV NSYEALDQAI RRDEVDMAFL SGKMALDAVT QRRMKVVAQV VRHDGLPGYR
ALLLARKAPP FNSMKSLLAE PERWRLARGE RQSVSGFIVP QLQLFLPNHI AMETRFLSEI
VGTHQTTALA VANSEADVAT NNTADFERFR QRFPAEAERL QVLWESELIP HAQIVVRREY
PPELRSRVQA FLVGYGRAKG PKGDAERVVL KSLHDLAGFV AADNSSLQPA AKLAYQLARQ
NAMGAQWVND AARQARLSRI ESGYAEQTAV LRDLSP
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