| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0501 |
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| Symbol | |
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| ID | 7972911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 540697 |
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| End bp | 542883 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791104 |
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| Product | Catalase |
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| Protein accession | YP_002942430 |
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| Protein GI | 239813520 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase
[COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCTC AGAACAAGGC CGCCGCCGGA CGCCGCTCGA AGGCCACGGA CGGCAGCAAC
GCCAAGCAGC AGCAGCTCGA TGGATTCGCA ACCGATCATG CGCCCAATCT GACGACCAAC
CAGGGTCTTC AGATCCCCGA CAACCACAAT TCGCTCAAGG CCGGGGTGCG CGGGCCCACG
CTGCTCGAAG ATTTCATCCT GCGCGAGAAG ATCACGCACT TCGACCACGA GCGCATCCCG
GAGCGCGCGG TGCATGCGCG CGGCTCGGCG GCGCATGGCT ATTTCCAGGT CTACAAGTCG
ATGTCGCAGT TCACCTGCGC CGACTTCCTG CAGGACCCGG ACGCAAAGAC GCCCGTTTTC
GTGCGCTTTT CCACCGTGGC CGGCTCGCGC GGCTCGGCCG ACACGGTGCG CGACGTGCGC
GGCTTTGCCG TCAAGTTCTA CACCCGCGAG GGCAACTACG ACCTCGTGGG CAACAACATC
CCGGTGTTCT TCATCCAGGA CGCGATGAAG TTTCCCGACC TGATCCACGC CGTCAAGCCC
GAGCCGCACC ACGAGATGCC GCAGGCCGCC AGCGCGCACG ACACCTTCTG GGATTTCGTC
TCGCTCATGC CCGAGAGCAC CCACATGCTG ATGTGGGCGA TGAGCGACCG CGCCATCCCG
CGCAGCCTGC GCATGATGGA AGGCTTCGGC GTGCACACCT TCCGCTTCGT CAACCTGCGC
GGCGAGAGCC ACTTCGTGAA GTTCCACTGG AAGCCCAAGC TCGGCATCCA TGGCCTCGCA
TGGGACGAGG CACAGAAGGT CGCGGGCAAG GACCCCGACT TCCACCGCCG CGACCTGTGG
GAGGCGATCG AGCAGGGCGA CTTTCCCGAG TGGGAGCTCG GCGTGCAGCT GGTGCCGCCC
GACAAGGCCG ATTCGCTCGG CTTCGACCTG CTCGACCCCA CCAAGCTGAT CCCCGAGGAG
ATGGTGCCCG TGCAGCGCAT CGGCCGGCTG GTGCTCAACC GCAACCCCGA GAACTTCTTT
GCCGAGACCG AGCAGGTGGC CTTCCACCCG GGGCACGTGG TGCCCGGCAT CGACTTCAGC
AACGACCCGC TGCTGCAGGG GCGCCTGTTC TCCTATACCG ACACGCAGAT CTCGCGCCTG
GGCGGGGCCA ACTTCCACGA GCTGCCCATC AACAAGAGCG TGTGCCCGTT CCACAACTTC
CAGCGCGACG GCATGCACCG CCAGACCATC GCGCGCGGCC AGGTGGCCTA CGAGCCCAAC
TCGCTCGGCG ACGGCAAGGA GTTCAGGGTG GACGGCGGCA GCGTCGGCTT CCAGCCGCAT
CCCGACGAGC TCGAGTCGCC CAAGGTGCGC CGGCGCAGCC CGAGCTTCGA CGACCACTTC
ACGCAGGCGC GGCTGTTCTT CAACAGCCAG AGCGCGGCCG AGAAGGAGCA CATCGTTGCG
GCCTTCCGCT TCGAGCTTTC GAAGGTCGAC GTGCCGGCCA TCCGCCAGCG CATGGTCGAC
AACCTGGCGC ACGTCGACGA GAAGCTCGCG CGCCGCGTGG CCGAGCCGCT GGGCATCGGC
GCGCCGGACG CCAAGGCGGC CGCGGGCCGC GCGGGCTACC GCGAGCACCG CATGACCCTG
CCCATCGAGG AGTCGCCCGC GCTCAGCATG GCCGACAGCG GCGACGGCTC GATCCGCACG
CGAAAGATCG CGATCCTCGC GGCCGACGGC ATCGACTCCG CCTCGCTCAA GCCGATCCGC
GATGCGCTCG AGCAGGCCGG CGGCAAGTGC AAGGTGGTGG GCGCCCGCCT GGGCACCATC
GCCAGCGCAT CGAAGCGGCA GATCGACGTC GACATGACCT TCGCCAACGG GCCGTCGGTC
GTGTTCGATG CCGTGCTGAT CCCCGGCGGC GCCCAGGGCG TGGCGGCGCT GGCGGGCATG
GGCGATGCGG TGCACTTCGT GCTTGAGGCG TACAAGCACT GCAAGGCCAT CTGCACCGTG
GGCGACGGCG TGCAGCTGCT CTCCACGCTC GGCATCGGCG CCAACGCGCA GCAGGGCGAT
GCGCCCGCCG GCATCATCGT GGCGGCCACG CCGGTCACCA ACCTCGGCGA CACCAGCGAG
GCGACGCAGA TCGCGCAGGC CTTCATCGCC GCGATTGCCA GGCACCGCCA CTGGGACCGC
GCCAACATCG ATGCGATTCC CGCCTGA
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| Protein sequence | MTPQNKAAAG RRSKATDGSN AKQQQLDGFA TDHAPNLTTN QGLQIPDNHN SLKAGVRGPT
LLEDFILREK ITHFDHERIP ERAVHARGSA AHGYFQVYKS MSQFTCADFL QDPDAKTPVF
VRFSTVAGSR GSADTVRDVR GFAVKFYTRE GNYDLVGNNI PVFFIQDAMK FPDLIHAVKP
EPHHEMPQAA SAHDTFWDFV SLMPESTHML MWAMSDRAIP RSLRMMEGFG VHTFRFVNLR
GESHFVKFHW KPKLGIHGLA WDEAQKVAGK DPDFHRRDLW EAIEQGDFPE WELGVQLVPP
DKADSLGFDL LDPTKLIPEE MVPVQRIGRL VLNRNPENFF AETEQVAFHP GHVVPGIDFS
NDPLLQGRLF SYTDTQISRL GGANFHELPI NKSVCPFHNF QRDGMHRQTI ARGQVAYEPN
SLGDGKEFRV DGGSVGFQPH PDELESPKVR RRSPSFDDHF TQARLFFNSQ SAAEKEHIVA
AFRFELSKVD VPAIRQRMVD NLAHVDEKLA RRVAEPLGIG APDAKAAAGR AGYREHRMTL
PIEESPALSM ADSGDGSIRT RKIAILAADG IDSASLKPIR DALEQAGGKC KVVGARLGTI
ASASKRQIDV DMTFANGPSV VFDAVLIPGG AQGVAALAGM GDAVHFVLEA YKHCKAICTV
GDGVQLLSTL GIGANAQQGD APAGIIVAAT PVTNLGDTSE ATQIAQAFIA AIARHRHWDR
ANIDAIPA
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