| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0499 |
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| Symbol | |
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| ID | 7972909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 539378 |
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| End bp | 540196 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791102 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_002942428 |
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| Protein GI | 239813518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCA AGATCGGTTT CGACATCGAA CTCGCCGTCA CGGCGCCCAC CGCACTGGTC
TACATGCTGC ATGTCCACCC CTCGCGCGCG GCGGACCTGC AGGACGGTGA GCACGTCACC
CTCACGCCGC CGCTGCATAC CGACTACTAC GTGGACGGCT TCGACAACCA TTGCGCGCGC
GTGCGCATTC CCGCAGGGGT AGCGAGCGTG CGGCTGCGCA ACCATGCGGT GGTGTTCGAC
CCGGGCTGGG CCGATCCGGT TGACTTCGGC GCCGTCGAGC ACGCGGCGGC GGACCTGCCG
GTCGCCACCC TGCCCTTCCT GCTGCCGAGC CGCTACTGCG AGGTCGACAG CGAACTGCTC
GCCTTCGCCT GGAGCAACTT TTCCAGCGTG GCGCCGGGCT GGCACCGCGT GCAGTCCATC
TGCGACTTCG TGCACGAGCA CCTGCGCTTC GACTACCAGA GCGCGCGCGC CACGCGCACG
GCGCTCGAGG GGTTCCGCGA GCGCACGGGC GTGTGCCGCG ACTTCGCCCA CCTGGCGATC
ACGCTGTGCC GCTGCATGAA CATTCCCGCG CGCTATGCCA CCGGCTACCT GGGCGACATC
GGCATTCCGC CCGTGCCCTC CCCGATGGAC TTCAGCGCCT GGTTCGAGGT GTACCTGGGC
GAGCGCTGGT ACACCTTCGA TGCGCGCCAC AACGTGCCGC GCATCGGCCG CATCGTGATT
GCGCGCGGAC GCGACGCGGC CGACGTGCCG ATCACCATGG TGTTCGGCGC CAACTCGCTC
AAGCGCTTCG AAGTGACGAC CGAGGAAGTG CCGCAGTAG
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| Protein sequence | MQIKIGFDIE LAVTAPTALV YMLHVHPSRA ADLQDGEHVT LTPPLHTDYY VDGFDNHCAR
VRIPAGVASV RLRNHAVVFD PGWADPVDFG AVEHAAADLP VATLPFLLPS RYCEVDSELL
AFAWSNFSSV APGWHRVQSI CDFVHEHLRF DYQSARATRT ALEGFRERTG VCRDFAHLAI
TLCRCMNIPA RYATGYLGDI GIPPVPSPMD FSAWFEVYLG ERWYTFDARH NVPRIGRIVI
ARGRDAADVP ITMVFGANSL KRFEVTTEEV PQ
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