| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0487 |
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| Symbol | |
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| ID | 7970228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 527474 |
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| End bp | 528433 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791090 |
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| Product | thiamine-monophosphate kinase |
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| Protein accession | YP_002942416 |
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| Protein GI | 239813506 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGAAT TCGACCTGAT CACACGCTAC TTCCAGCGCC CCGCCAAGCG TTCCCCGCTC
GGCGTGGGCG ACGACTGCGC ATTGCTCGCG CCCGCGCCCG GCATGCAGCT TGCCGTGTCC
TGCGACATGC TGGTCGAGGG CCGGCACTTT CTGTCGACCG TCGATCCCGC GCGGCTCGGC
CACAAGGCGC TGGCGGTGAA CCTCAGCGAC CTGGCGGCCT GCGGCGCAAA GCCGCTGGCC
TTCACGCTCG CGCTCGCGCT GCCCGGTGTC GACGAGCCCT GGCTCGAAGC CTTTTCGCGC
GGCCTGTTCG CGCTGGCCGA CGAGCACGGC TGCGAGCTCG TGGGCGGCGA CACCACGCGC
GGCCCGCTCA ACATCTGCAT CACCGTGTTC GGCGAAGTGC CGGCCGGCGC GGCGCTGCTG
CGCTCGGGCG CGCACGCGGG CGACGACATC TGGGTCAGCG GCACGCTCGG CGACGCGCGG
CTCGCGCTCG AGGCGTTCCG CGGCACGCTC TCACTGCCCG CCGACGTGTT CGCGCAGGCG
CGCATGCGCA TGGAGCAGCC CACGCCGCGC GTGGCGCTGG GCCAGGCGCT GCGGGGCAAG
GCTTCTGCGG CGGTGGACGT GAGCGATGGC CTCGTGGGCG ACCTGGGCCA CATCCTCGCG
TCGAGCAAGG TGGGCGCCAC GCTCAATGCC GATGCGGCCA CCGGCGTGAT CGCCGCGGCC
GCGTCCTGCG GCCTCGGCAC CGAGATCCTG CGCACCTGCG CGCTTTCAGG CGGCGACGAC
TACGAGCTGG TCTTCACCGC ACCGCCCGCC GCGCGCGCCG CGGTCGAACA GGCCGGCAGG
GAAAGCACCA CGCGCGTGAC GCGCATCGGC CGCATCGACG CCGAGGCCGG CCTGCGCATC
GTGGACGCCG GCGGCGCGCC GGTGGCGCAG CGCTTCGGCT CCTTCGACCA CTTCGTCTGA
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| Protein sequence | MGEFDLITRY FQRPAKRSPL GVGDDCALLA PAPGMQLAVS CDMLVEGRHF LSTVDPARLG
HKALAVNLSD LAACGAKPLA FTLALALPGV DEPWLEAFSR GLFALADEHG CELVGGDTTR
GPLNICITVF GEVPAGAALL RSGAHAGDDI WVSGTLGDAR LALEAFRGTL SLPADVFAQA
RMRMEQPTPR VALGQALRGK ASAAVDVSDG LVGDLGHILA SSKVGATLNA DAATGVIAAA
ASCGLGTEIL RTCALSGGDD YELVFTAPPA ARAAVEQAGR ESTTRVTRIG RIDAEAGLRI
VDAGGAPVAQ RFGSFDHFV
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