Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0483 |
Symbol | |
ID | 7970224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 524011 |
End bp | 524565 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644791086 |
Product | CinA domain protein |
Protein accession | YP_002942412 |
Protein GI | 239813502 |
COG category | [R] General function prediction only |
COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAACA CGATGGAAGC CTCGACCCCA GCGAATTTTC TTGCCGACCA GGACACGCCC GCGCTCGTCG CGGCCTTGGC CGAACTGCTG CTGAAGAAGG GCTGGATGCT GGCCACGGCC GAAAGCTGCA CCGGCGGGCT CATTGCCGGC GCATGCACCG AGCTCGCGGG CTCCAGCGCC TGGTTCGAGC GCGGCTTCGT CAGCTACTCG AACGCGGCCA AGACCGAACT GCTGGGCGTC GACGCCGCGC TGATCGAAGC CCACGGCGCG GTCAGCGAGC CGGTGGCGCG CGCCATGGCC GAAGGCGCCA TCGCGCATTC GGCAGCGCGT GCCGCGGTGG CCGTGACCGG CGTGGCCGGC CCTACCGGCG GCAGCCCCGA CAAGCCGGTC GGCACCGTGT GGTTCGGCTG GTCGGCCGGC GGGCAGGTGC GCACCGAGCG CCGCCGCTTC GACGGGGACC GCGCCGCGGT GCGCGCCGCC ACGGTGCACT ACGCCCTGCA GACACTGGTG GGCCTGCTCG GCCCGCAGCC CGGCACAACA ACGAAGGCCC CATGA
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Protein sequence | MVNTMEASTP ANFLADQDTP ALVAALAELL LKKGWMLATA ESCTGGLIAG ACTELAGSSA WFERGFVSYS NAAKTELLGV DAALIEAHGA VSEPVARAMA EGAIAHSAAR AAVAVTGVAG PTGGSPDKPV GTVWFGWSAG GQVRTERRRF DGDRAAVRAA TVHYALQTLV GLLGPQPGTT TKAP
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