| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0480 |
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| Symbol | |
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| ID | 7970221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 522024 |
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| End bp | 523211 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791083 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002942409 |
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| Protein GI | 239813499 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCTGG CGCTGTGCGC CGGCGTGGCG CTGAGCCAGG CCTTTCGCAC GGTAGGCGCC
ATCATGGCGA GCCCGCTGCA GGCCGACTTC AGGCTCTCGG CCCAGGCATT GGGCATTTTC
TCGGGCGCCT TTCATTTCGC CTTTGGCGCG ATGCAGCTCT TCATGGGCAT CGGCATCGAC
CTGCATGGCG TGCGGCGCAC GGTGCTGGTG GCTTTTCCGG TCGCCATCGC GGGTGCGCTG
CTGTCGGCGC TCGCGCCGAG CTACGCGGTG TTGGTGGCGG GGCAGGCGCT GATCGGCGTC
GGCTGCGCGC CGGCCTTCCT GGTGTGCACC GTGTTCATCG CGCGGCACTT TCCGGCCGCG
CGCTTTGCCA CCGTCTCGGG CCTGGTGCTG GCGATCGGCG GCCTGGGCAT GCTGGCCACC
GGCACGCCGC TCGCGTGGCT GGTGCAGGCC TATTCGTGGC GCGCGGGCTT CCTGGTGCTG
GCCGTGGCCT CGGCGCTGGC GTGGCTCGCG ATCTGGCACT GGGTGCGCGA GCCCGCCGCG
GCCGTGCCGC GGGTGAACGA GTCCATTCCC GAGGCCATCC GCCAGTTCGG CGCGCTGCTC
GCAATGCCGC ACACGCTCGG CATCGTCATG CTCGGGGCCG TGACCTACGC CGCCTTCATC
TCGCTGCGCG GGCTCTGGCT CGGACCGCTC ATGATGGAGC GCCACGGCTA CTCGCTGGTG
CAGAGCGGCA ACGTCGCCAT CGCGGTGTCG GTGATCTCGC TGTTCGGTGC GCCGCTGTTC
GGCCGCTTCG ACCGCGATGG CGCCGCGCGC CGCCGCCGGA TCGTGGTGTG CGCGCTCGGC
TATGCGGCGC TGTTCGCGCT CATCGCCTTC ACGCATTCGG CCTGGCTGGA CATCGGCGGC
ATGGTGCTGA TCGGCGTGCT CTCGGGCTTC ATCGTCTGGC AGTACGCCGA CGTGCGCGTG
GCTTATCCGG CGACGCTCAC GGGCCGCGCG ATGGCGGTCT TCACCATGGC GATGTTCCTC
GGCGTCGCGC TCATGCAGTG GGCCACCGGC GTGGCGGCCT CGGTGGCCGC GGCGCATGGC
GGCGATCCGC TCAGGGCCGT GCTGGCCACC ATTGCCGCGC TGCTGGTGCT GGGCATCGCG
GCCTTCGCGT GGCTGCCCGC GCCGAAGGCC GACGCCCTCA GATCTTGA
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| Protein sequence | MVLALCAGVA LSQAFRTVGA IMASPLQADF RLSAQALGIF SGAFHFAFGA MQLFMGIGID
LHGVRRTVLV AFPVAIAGAL LSALAPSYAV LVAGQALIGV GCAPAFLVCT VFIARHFPAA
RFATVSGLVL AIGGLGMLAT GTPLAWLVQA YSWRAGFLVL AVASALAWLA IWHWVREPAA
AVPRVNESIP EAIRQFGALL AMPHTLGIVM LGAVTYAAFI SLRGLWLGPL MMERHGYSLV
QSGNVAIAVS VISLFGAPLF GRFDRDGAAR RRRIVVCALG YAALFALIAF THSAWLDIGG
MVLIGVLSGF IVWQYADVRV AYPATLTGRA MAVFTMAMFL GVALMQWATG VAASVAAAHG
GDPLRAVLAT IAALLVLGIA AFAWLPAPKA DALRS
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