| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0467 |
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| Symbol | |
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| ID | 7970208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 509891 |
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| End bp | 511495 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791070 |
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| Product | phospholipase D/Transphosphatidylase |
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| Protein accession | YP_002942396 |
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| Protein GI | 239813486 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCC GCCTGCTGTC GCGCTGTGGG CAATGGGTCT TCGCCATGGC GGCGGTGCTG
CTGTTCGCCG GCTGCGCCAC CCTGCCCGAC GAGGCGCCGC GCCCGGCCAC CCGGGCCATG
GCCGCCTCGG CCGACACCGC GCTCGGCAAG ATCGCGCAGG CCTCGCAGCC CGACCCCGAC
CTGAGCGGCT TTCGCCTGAT GCCGGGCGGC GACTTTGCCT TCGACACCCG CATCCAGCTC
GCGCGCCGCG CCCAGCGCAC GCTCGACGTG CAGTACTACC AGATCGAGAA CGACGAGACC
GGCCGCTACC TGCTGCGCAC GCTGCGCGAC GCGGCCCGGC GCGGCGTGCG CGTGCGGCTC
CTGATGGACG ATCTCTACAC CTCGGGCGAG GACGAGCTGC TGCTCGGCCT GGCCGCCACG
CCGAACGTCG AGCTGCGCCT GTTCAATCCG TTTCCGGCCG GGCGCGGCAG CCTGCTCAGG
CGCTTCACCG CCTCGCTGTT CGACTTCAGC CGCGTCAACC GGCGCATGCA CAACAAGCTC
TTCATCGCCG ATGGCGCGAT GGCGGTGGCG GGCGGGCGCA ACATCGGCAA CCAGTATTTC
AGGCGCACGG CGGGCGAGAA TTTTCTCGAT CTCGATACCT TCGTCGCCGG CGCGCTGATT
CCGCGCCTGG GCGCGCTGTT CGACCAGTAC TGGAACAGCG TCTATGTGCG GCCGGTCCAG
TCGGTGGTGG CGAGCGCGCT GACACGTGAC GAGCTGCAGA AGCGCTTCGA CACCGCCACC
GGGCCCGACA CCACGCCGCC GCCGCCCCGG CCCGCGCCCA ACGACCTGCT CGGCTACAGC
CCGATCGCCG AAGACCTGGA TGCCGGCAAG CTCGACCTGA TCTGGACGCT GGCCGAGGCG
TATGCCGATT CGCCCGAGCG CGTGATCGGC AAGACCGCCT CGTACGGCGG CGTGCCGCTG
CTCGACGTCG ACAGCGTGCG CTACAACGTG GTCGAGCAGA TGCGCCGCGC GCGCTCCGAG
GTGACCATCG TCTCGCCCTA CCTGATCCCG GGCAAGGCGG GGCTCGAAGT GATGCGCGAG
ATCCGCCGGC GCAACGTGAA GATCAGCATC GTCACCAATT CCTTCGCCGC CACCGACGAG
CCGCTGGTCC ACACCGCCTA CCGCCGCTAC CGGCCCGAGA TGCTCGAGCT CGGCGCCGAG
CTCTACGAAC TGAGCACCAC GCGCACGCGT CGCAGCGTGC GCCTCGGCCT GTTCGGCACT
TCGGTGGGGC GGCTGCATGC CAAGTCGGCG GTGATCGACC GGCAGGTTCT TTTCGTCGGC
TCGATGAACT TCGACCCGCG CTCCGAAACG CACAACACCG AGATCGGCCT GTTCATCCGC
AGCCCCGAGA TGGCGCAGCA GACGCTCAAG CTCATCGAGG TGCTGAAGCA GCAGGGCGCC
TACCGGCTGC GCTTTGCGAA GGACAGCGGC AATGCGCGCA TCGAGTGGAT CAGCGAGGAG
GAGGCCGGCC GGACCACCGT GCTGAACGAG GAGCCCGACT CCGATTTCTG GGGCCGCACC
ATGCTCGAGA TGCTGGCGCC GCTGACGCCC GAGAGCCTGC TGTAG
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| Protein sequence | MARRLLSRCG QWVFAMAAVL LFAGCATLPD EAPRPATRAM AASADTALGK IAQASQPDPD
LSGFRLMPGG DFAFDTRIQL ARRAQRTLDV QYYQIENDET GRYLLRTLRD AARRGVRVRL
LMDDLYTSGE DELLLGLAAT PNVELRLFNP FPAGRGSLLR RFTASLFDFS RVNRRMHNKL
FIADGAMAVA GGRNIGNQYF RRTAGENFLD LDTFVAGALI PRLGALFDQY WNSVYVRPVQ
SVVASALTRD ELQKRFDTAT GPDTTPPPPR PAPNDLLGYS PIAEDLDAGK LDLIWTLAEA
YADSPERVIG KTASYGGVPL LDVDSVRYNV VEQMRRARSE VTIVSPYLIP GKAGLEVMRE
IRRRNVKISI VTNSFAATDE PLVHTAYRRY RPEMLELGAE LYELSTTRTR RSVRLGLFGT
SVGRLHAKSA VIDRQVLFVG SMNFDPRSET HNTEIGLFIR SPEMAQQTLK LIEVLKQQGA
YRLRFAKDSG NARIEWISEE EAGRTTVLNE EPDSDFWGRT MLEMLAPLTP ESLL
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