| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0458 |
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| Symbol | |
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| ID | 7970199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 500251 |
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| End bp | 500703 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791061 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_002942387 |
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| Protein GI | 239813477 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3556] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTCG AAGCCATCCT CGCCTACCTG CATCTGCTGG CCATCCTCAC GATGGTCGTC
TTCATCTCGA GCGAAGCGGC GCTGTGCCGC GTGCAGTGGC TCAATGCCGC GGTGGTGGAG
CGGCTCGCCA AGGTCGACAT GGTCTACGGC ATGGCCGCCA TCGCGGTGCT CGCCACCGGC
ATCGCGCGCA CGGTGTGGGG CGTGAAGGGC ACGGCGTGGT ATTGGACCAA CCCGCTGTTG
CATGTGAAGC TCGGCTTGTT CATCATCGTC GGCGTGCTCT CGATCTTTCC GACGCTCACC
TACTTCCGCT GGCGCAAGGC GCTGCGCGCC AACGGCACGC TGCCGGCCGA GGCCGACATC
CGCAAGACGC GCCGGCTGGT GATGGTGCAG GCCCACCTGA TCGCGTTGAT CCCGCTGGTC
GCCGTGTTCC TCGCGCGCGG CTTCGGCAAG TAG
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| Protein sequence | MTLEAILAYL HLLAILTMVV FISSEAALCR VQWLNAAVVE RLAKVDMVYG MAAIAVLATG
IARTVWGVKG TAWYWTNPLL HVKLGLFIIV GVLSIFPTLT YFRWRKALRA NGTLPAEADI
RKTRRLVMVQ AHLIALIPLV AVFLARGFGK
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