| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0456 |
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| Symbol | |
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| ID | 7970197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 498008 |
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| End bp | 499198 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791059 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_002942385 |
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| Protein GI | 239813475 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAT CCCAACCCCT GCCGTACGCC GGCGTCCGCG TCGTCGAGTT CACCCACATG
GTGATGGGCC CGACCTGCGG CCTGCTGCTG GCCGACCTCG GCGCCGAGGT CATCAAGGTC
GAGCCCATCG AGGGCGACAG CACGCGCCGC CTGCTCGGCT CGGGCTCGGG CTTCTTCCCG
ACCTTCAACC GCAACAAGAA GAGCATCGCG CTCGACCTCA AGACACGGGA GGGCGTGGAG
GCCGCGCTGC GCCTCGTCGC CACGGCCGAC ATCGTGAGCG AGAACTTCAA GCCCGGCACC
ATGAAGAAGC TGGGCCTGGA CTACGACAGC CTGAAGCAGC TCAACCCGCG CCTCATCTAC
GTGAGCCACA AGGGCTTCCT GCCCGGCCCC TATGACCATC GCACGGCTCT GGACGAAGTG
GTGCAGATGA TGGGCGGCCT CGCCTACATG ACCGGCCGCG CGGGCGACCC GCTGCGCGCG
GGCACCAGCG TGAACGACAT CATGGGCGGC ATGTTCGGCG CCATCGGCGC GATGGCCGCG
CTGCGCCAGC GCGAACTCAC CGGCAAGGGC TGCGAGGTGC AGTCCGCGCT GTTCGAGAAC
AACGTGTTCC TGGTCGCGCA GCACATGATG CAGTTCGCCG CCACCGGCAA GGCTGCCGAC
CCGATGCCCA GCCGCATCTC GGCCTGGGCC GTGTACGACG TGTTCACCGT GAAGGACGGC
GAGCAGATCT TCCTGGCGGC CGTGAGCGAC AAGCAGTGGG CGATCTTCTG CAGGGCCTTC
GGCCTGGAAG AAATGCTGGC CGACCCGCGC TTGAAGACCA ACAACGACCG CGTGCTCGCG
CGCGACTGGA TGATGCCGAT CCTGCGCTCG CACCTGGCCG GCTACAGCGC CGCCGAACTC
AGCGCGGTGT TTGAGCAGAA CGAGCTGCCC TTCGCGCCCA TCACCAAGCC GCAGCAGCTG
TTCGACGACC CGCACCTGAA CGCCACCGGC GGCCTCGCGC CCGTGCGCAT GAACGACGGC
CACATGGCCA AGGTGCCGCT GATGCCCTTC ACGCTCGACG GCGAGCGCCC CGGCATCCGC
CTGCAGCCGC CGCGCGTCGG CGAGCACACG GGCGAGCTGC TGAGGGAAGT GGGCTACAGC
GAGGAAGAGA TCGCCGCGTT CGAGTCGCGC CAGGCCGGCA TCGCCCGCTG A
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| Protein sequence | MPESQPLPYA GVRVVEFTHM VMGPTCGLLL ADLGAEVIKV EPIEGDSTRR LLGSGSGFFP
TFNRNKKSIA LDLKTREGVE AALRLVATAD IVSENFKPGT MKKLGLDYDS LKQLNPRLIY
VSHKGFLPGP YDHRTALDEV VQMMGGLAYM TGRAGDPLRA GTSVNDIMGG MFGAIGAMAA
LRQRELTGKG CEVQSALFEN NVFLVAQHMM QFAATGKAAD PMPSRISAWA VYDVFTVKDG
EQIFLAAVSD KQWAIFCRAF GLEEMLADPR LKTNNDRVLA RDWMMPILRS HLAGYSAAEL
SAVFEQNELP FAPITKPQQL FDDPHLNATG GLAPVRMNDG HMAKVPLMPF TLDGERPGIR
LQPPRVGEHT GELLREVGYS EEEIAAFESR QAGIAR
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