| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0455 |
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| Symbol | |
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| ID | 7970196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 497074 |
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| End bp | 498015 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791058 |
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| Product | pyruvate carboxyltransferase |
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| Protein accession | YP_002942384 |
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| Protein GI | 239813474 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCCC CCGACGTCCT CATCAGCGAG GTCGGCCCGC GCGACGGCCT GCAGTCGGTC
AAGGCCACCA TGCCCACGGC GGACAAGCTG CGCTGGATCG ACGCGCTTCA CGCCGCCGGC
GTGCGCGAGA TCGAGGTCGC CTCCTTCGTG CCCGCCAGAT TGCTGCCGCA GATGGCCGAC
GCCGCCGAGG TGGTGCGCCA CGCCATCACC TTGCCCGGCC TCACCGTGAT GGCGCTGGTG
CCCAACCGCA AGGGCGCGCA GGCGGCGCTC GAAGCGGGCG TGCACAAGCT CACGATGCCG
GTTTCGGCCA GCGTGGCGCA CTCGCTTGCC AACGTGCGCA AGACGCCGAC CGAAATGGTC
GAGGAAGTGC GCGCCATCTC CGAGCTGCGC CGCGCGATGG CGCCGCATGT GAGGCTCGAG
GCCGGCATCT CCACCGCCTT CGGCTGCACG CTGCAGGGGC TGGTGCCGGA AGACGACGTG
ATCCGCCTCG CCGCGCAGTG CATCGAGGCC GGCGCGGAAG AAGCGGGCCT TTCGGACACC
GTCGGCTATG CCAACCCCGC GCAGGTGCGC CGGCTCTTCA GGCGCCTGCG CGCCGAGCTC
GGCACGCACG CCGGCGCCGC CCACATGCAC AACACGCGCG GCCTCGGCAT CGCCAACTGC
CTGGCCGCGT GGGACGAGGG CGTGCGCACC TTCGACGCCT CGCTCGGCGG CCTTGGCGGC
TGCCCTTATG CGCCCGGCGC CTCGGGCAAC GCGGTCACCG AGGATCTCGT CTTCATGTTC
GAGGCCATGG GCGTTCGCAC CGGCATCGAC ATCCAGAAGC TCATCGCGGC GCGCGCGCCG
CTCATGGCCG GCCTGCCCGG CGAACCGGTC TACGGCATGA CGCCCGAAGC CGGCCTGCCC
AAGGGCTTTG CCGTCCAACA GGAAACCACC CCACATGCCT GA
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| Protein sequence | MTPPDVLISE VGPRDGLQSV KATMPTADKL RWIDALHAAG VREIEVASFV PARLLPQMAD
AAEVVRHAIT LPGLTVMALV PNRKGAQAAL EAGVHKLTMP VSASVAHSLA NVRKTPTEMV
EEVRAISELR RAMAPHVRLE AGISTAFGCT LQGLVPEDDV IRLAAQCIEA GAEEAGLSDT
VGYANPAQVR RLFRRLRAEL GTHAGAAHMH NTRGLGIANC LAAWDEGVRT FDASLGGLGG
CPYAPGASGN AVTEDLVFMF EAMGVRTGID IQKLIAARAP LMAGLPGEPV YGMTPEAGLP
KGFAVQQETT PHA
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