| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0454 |
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| Symbol | |
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| ID | 7970195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 496208 |
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| End bp | 496948 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791057 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002942383 |
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| Protein GI | 239813473 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGCA AAGCCCAGAC CGAATCGGTT TCAGACCTCA ATGCCGCGCC CGGCGGCGCC
GCCGCGGTCG ACCGCGCGCT GAGCCTGCTT TCGGCCTTCC AGCCCGGCGA CGAGGCGCTG
TCGCTCGCGC AGTTTGCCGA GCGCACACAG CTCTACAAGA GCACGGTGCT GCGGCTTCTG
GCCTCGCTCG AACATGCGCG GCTGATCCGC CGGCAGGACG ACGGGCGCTA TGCGCTGGGC
GCGGAGATCG CGCGGCTGCA CGGCCTCTAT GCGGCGTCGC TGTCGCTCGA TCGCATCGTG
CTGCCGGTGC TGCGCGCGCT GGCCGCCACC ACGGGCGAGA GCGCGGCGTA TCACGTACGA
CAGGAACAGG GCGACAGCTG GGTGCGGCTG TGCCAGTTCC GTGTCGATTC CTCGCACGTG
GTGCGCGACC ATGTGCGCGC AGGCGACCTG CTGCCCAACG ACCGCGGCGC GGGCGCGCGC
GTGCTGATCG CCTTCGGCCC CGAGGCCGAG CGCCCACGCG GCACCAGGGA GCGCAAGCTG
TACGACGAGA TCCGCGCCCA GGGCTACTGC GCGCTGGTGG GCGACCGCAC GGCCGAGCTG
GCCGGCATCT CGGCACCGGT GTTCCATGCC GACGGCAGCC TCGCCGCGGC GGTCACGCTG
ACGATGCCGG CGCATCGCTA CGACGCGCGC CACATCGAGC CGGTACGCGC GGCGGCCCGC
GAGCTGAGCG GAACCCTCTG A
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| Protein sequence | MPRKAQTESV SDLNAAPGGA AAVDRALSLL SAFQPGDEAL SLAQFAERTQ LYKSTVLRLL
ASLEHARLIR RQDDGRYALG AEIARLHGLY AASLSLDRIV LPVLRALAAT TGESAAYHVR
QEQGDSWVRL CQFRVDSSHV VRDHVRAGDL LPNDRGAGAR VLIAFGPEAE RPRGTRERKL
YDEIRAQGYC ALVGDRTAEL AGISAPVFHA DGSLAAAVTL TMPAHRYDAR HIEPVRAAAR
ELSGTL
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