| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0453 |
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| Symbol | |
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| ID | 7970194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 495419 |
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| End bp | 496096 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791056 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_002942382 |
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| Protein GI | 239813472 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAC CCGGCGCAGT GCTCTTCGAT GCCTACGGCA CGCTGTTCGA CGTCTACAGC
GTCGGGCAGA CGGCCGAGCG GCTGTTCGCG GGCCAGGGTC AGGCGCTGGC CGCGGGCTGG
CGCGACAAGC AGATCGAATA CACGCGACTC GTCACCACCA GCAACCACGG CGCCCACTAC
CGGCCCTTCG GCGAACTCAC GCGCGCCGCG CTGCGCTACA CCTGCAAGCG GCTGGGCCTC
GGCCTGACCG AAGCCGCCGA GCAGCAGCTG ATGGACCAGT ACCGCACGCT CACGGCCTTT
CCCGAATGCC GCGAAGTGCT CCAGGCGCTC AAGGCGCGCG GCGTGGCCAC CGGCATCCTC
TCGAACGGCG ACCCCGGCAT GCTCGACGCC GCCGTGCGCA GCGCCGGGCT CGATGGCCTG
CTGGACCATG TGCTGAGCGT CGACGGCATC CGCAAGTACA AGACGCATCC CGACGCGTAC
CAGCTCGGCG TCGCCGCCGC CGGCCTGCCG CCCGCGCGCA TCGCCTTCGT GAGCTGCAAC
GGCTGGGACG CGCTCGGCGC CACCTGGTTC GGCTTTCGCA CGCTCTGGGT CAACCGCTAC
CAGCTCCCGT TCGAAGAACT CGGCACGCAG CCCGAACGCA TCGGCAGCAG CCTGCGCGAC
GTGCTCGGGT TCTTCTGA
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| Protein sequence | MDQPGAVLFD AYGTLFDVYS VGQTAERLFA GQGQALAAGW RDKQIEYTRL VTTSNHGAHY
RPFGELTRAA LRYTCKRLGL GLTEAAEQQL MDQYRTLTAF PECREVLQAL KARGVATGIL
SNGDPGMLDA AVRSAGLDGL LDHVLSVDGI RKYKTHPDAY QLGVAAAGLP PARIAFVSCN
GWDALGATWF GFRTLWVNRY QLPFEELGTQ PERIGSSLRD VLGFF
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