| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0450 |
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| Symbol | |
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| ID | 7970191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 490473 |
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| End bp | 491783 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791053 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002942379 |
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| Protein GI | 239813469 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.912084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCGA ACGCGGCATC CAAGCCCGCG GAGCGCCCCA GCTCACGCCT CTCCCGTTTC
TCCCGCTGGT CCACCTCGAC CACCGCGATG TTGATCGCCC TCGCCTCGGC CTTCGCCCTG
AGCCAGGCCT TCCGCACCGT CGGCGCCATG ATGGCCACGC CGCTCAGCGG CCACTTCGGC
CTCTCGCCCC AGCAGATCGG CACCTGGGCA GGCACCTTCC ACTTCATGTT CGGCATCATG
CAGCTCGCGA TGGGCGTGTC GATCGACACG TTCGGCGTGC GCCGCACGGT GCTTGCCGCC
TTTCCGCTGG CCGTCGCGGG TGCCGTACTT TGCGCAGTGG CATCGAGCTT CCATGCGCTG
CTGCTGGGGC AGGCGCTGAT CGGTGTCGGC TGCGCGCCGG CCTTCCTGGC CTGCACGGTG
TTCATCGCAC GGCATTTCGA TGCCTCGCGC TTCACCGCGA TGTCGGGGCT GGTGATGAGC
CTCGCGGGCC TGGGCATCCT GTTCACCGGC ACGCCGCTGG CACTGCTGAT CGAAGCCGCG
TCATGGCGCG CCGGCTATGC GGTGCTGGCT GCGTCCGCCG TGCTTTCGTG GATCCTCATC
TTCTGGCGCG TGCGCGACCC CGTGCGCGCG GAGGACCGCA CGAGCGCGGA GACCGCGCCG
GCCGAACGCC AGTCGCTGCG CAAGGCCGTG CGCGAACTGC TCCCGCTCTT TGCCATGCCG
CACACGCTGG GCCTGCTGTG CTTTGCCTGC GTGTCGTATG CGGCCTTCAT CACCCTGCGC
GGCCTTTGGC TCGGCCCCGT GCTGCACGAC CGCCATGGGC TGTCGCTGGT CAGCAGCGGC
AACGTGGCGC TGGTGATGAC CATCGCCGGC ATGATCAGCC CCGCCATGTT CGGCCGCCTC
GACCCGGGCG GCAGGCGGCG CGGCCGCTGG CTCATGGGCT GCGCGTTCGC GGCCGCGGTG
ATCTTCGCGT TCATGGCGCT CACGCATTCG CTCGCCGTCG ACATCGGCCT GCCGATCCTC
TATGGCCTGC TCTCGGGCTA CTCGGTGCTG CAGTATTCGT ACACGCGCGC CGCCTATCCG
GCGGCCATGA CGGGGCGCGC GCTGTCGCTG CTCAACATGG CGATGTTCCT CGGCGTGTCG
CTGATGCAGT GGACCACGGG CGTGGCCGCG TCGTGGGCCG CGTCGAACGG CGTGGAGCCG
TTTCGCGCGG TGTTCCTCAC GATCACGGCC ATGCTGGCGG TGGGCACCCT GGCGTTCCTG
TTGCTGCCGC GCGCGCACGA AAAAGCGGGC CTCGCCTCCG CGCAGCCCTG A
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| Protein sequence | MNPNAASKPA ERPSSRLSRF SRWSTSTTAM LIALASAFAL SQAFRTVGAM MATPLSGHFG
LSPQQIGTWA GTFHFMFGIM QLAMGVSIDT FGVRRTVLAA FPLAVAGAVL CAVASSFHAL
LLGQALIGVG CAPAFLACTV FIARHFDASR FTAMSGLVMS LAGLGILFTG TPLALLIEAA
SWRAGYAVLA ASAVLSWILI FWRVRDPVRA EDRTSAETAP AERQSLRKAV RELLPLFAMP
HTLGLLCFAC VSYAAFITLR GLWLGPVLHD RHGLSLVSSG NVALVMTIAG MISPAMFGRL
DPGGRRRGRW LMGCAFAAAV IFAFMALTHS LAVDIGLPIL YGLLSGYSVL QYSYTRAAYP
AAMTGRALSL LNMAMFLGVS LMQWTTGVAA SWAASNGVEP FRAVFLTITA MLAVGTLAFL
LLPRAHEKAG LASAQP
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