| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0447 |
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| Symbol | |
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| ID | 7970188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 488192 |
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| End bp | 489127 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791050 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942376 |
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| Protein GI | 239813466 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCCAG AGAATGCGAA AGCCCTCGGC ACCGCCTCCG GCGAGCTACC GCCGCTCGAA
CTGCTGCGCA GCTTCGAGGC CGCGGCGCGC CGGCTGAGCT TCACGCTCGC GGCCGGCGAG
CTGCACCTGA CCCAGTCGGC CGTGAGCCGC CAGATCCAGC AGCTCGAAGC CAGCCTGGGC
GTGCTGCTGT TCGAGCGCCG GCACCGCGCG CTGGCGCTCA CCGAAGCCGG CGGCGTGATG
CAGCGGGCCG TGACCGACAG CCTGGAGCGG CTGCGCGACG CCACCGCGCG GGTGCGTGCC
AGTTCCGCGC CGCGCCAGGT GGCGATCACC ACCACGCCGG GTTTTGCATC GCTCTGGCTC
ATTCCGAAGC TCGCGCGCTT CACCGGCAGC CATCCGCAGG TCGACGTGCG CGTGTCCGCC
ACGCTCGACG TGCTCGACCT GGAAAGCAGC CGGCTCGACT TGGCGGTGCG CTTCATGCCG
ATCGGCCGCG GCATCGGCCC GGCGCTGTTC GAGGAATCGG TGATCCCGCT GTGCTCGCCG
CAGCTTGCCG CCTCGCTGCG CACGCCGGCG GACTTTTCGA AGCTCACCCT GCTCACCGTC
GAATATCCGG ACCACAGCGA AGCGCCCACC GCCGATTGGG AACCTTGGCT CAAGGTGATG
GGGCTCGACG ACCTGCGCAT GAAGAGCACG CTGCGCTTCA CCCAGTACGC CGATGCGGTG
GCCGCCGCCG TGGCCGGGCA GGGCGTGGTG ATCGGCCGGC TGCCGCTGCT GCGCGAACTG
GTGCAGGACG GCCGCCTGGT GGCGCCGCTC GGCGAGGGCG CGGCCTCGCA TCGCGGCTAC
TTCATCGAGG CCTCGCGGCG CGCCGCCGGC AACCGCGATG CGCAGGAGTT CGCAGAGTGG
CTGCGCGACG AAGCCGAGGC GGCGCAGCGG AGCTGA
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| Protein sequence | MLPENAKALG TASGELPPLE LLRSFEAAAR RLSFTLAAGE LHLTQSAVSR QIQQLEASLG
VLLFERRHRA LALTEAGGVM QRAVTDSLER LRDATARVRA SSAPRQVAIT TTPGFASLWL
IPKLARFTGS HPQVDVRVSA TLDVLDLESS RLDLAVRFMP IGRGIGPALF EESVIPLCSP
QLAASLRTPA DFSKLTLLTV EYPDHSEAPT ADWEPWLKVM GLDDLRMKST LRFTQYADAV
AAAVAGQGVV IGRLPLLREL VQDGRLVAPL GEGAASHRGY FIEASRRAAG NRDAQEFAEW
LRDEAEAAQR S
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