| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0438 |
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| Symbol | |
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| ID | 7970179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 480137 |
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| End bp | 481510 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791041 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942367 |
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| Protein GI | 239813457 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.627607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGC CACCTGACCA TGCCAGCGCT CCCGAACCGG GCGCGCCCTC CCACCTTGCC
TCCGAACTCG CGGCGCCCAC CGTGAGCCGC GCCTACCGCT GCCAGTGCGG CCGGCCTGTG
TTCCTGCGCA ACAGCCAGTG CCTGGCCTGC CGCACGCCGC TCGGCTACGT GATCGAGCGC
CTGGGCGTGG TGCCGCTGGC GCCGGTCGAG GCCGAAGACA AGGCCGAGGG CGGCGCAGCC
GACGGCGCCG AGCCTGAAGA ACAAGAGCAA CTCTTCACCG TGTTCGGCAA CCCCGACGGC
CGCACCTACC GCCGCTGCGC CAACCTCATG ACCGCCGCCA GCTGCAACTG GATGGTGCCG
GCCCCGCGCG AGGGCGACGA CCCTTCGTTC AACACCGACG GCCTCGCGCC CGGCTACTGC
CTGGCCTGCA GCGTCACCCG CACCATCCCC GATCTCTCGG TGGAGAGCAA CGGCGAACTC
TGGCGCAAGC TCGAGCATGC GAAGCGCCGG CTCATCTCGC AGCTGCTCGC GCTCGGGCTG
CCGGTGGTCA GCCGCCATGC CGATCCGGTG CACGGGCTGG CCTTCGACTT CCTCGGCAAC
ATGCCGGGCG GCCCGCACGT GATGACCGGG CATGAACAGG GCGTGATCAC CCTCAACGCC
GAAGAGGCCG AGGACGCCGT GCGCGAGCGC ATCCGCGCCG AAATGCGCGA GCCCTACCGG
ACGCTGCTCG GGCATTTCCG CCACGAGGTC GGCCACTACT ACTGGGACCT GCTGGTGCAG
CCCACGCCCT GGCTCGACGG GTTCCGCGCG CTCTTCGGCG ACGAGCGCGC CGACTACGCC
GCGGCGCTCC AGCAGCACTA CGAACAGGGC CCGCCGCCCG ACTGGGCCAA CCGCTTCGTG
AGCAGCTACG CGAGCATGCA TCCCTGGGAG GACTGGGCCG AGACCTGGGC CCACTACCTG
CACATGGCCG ACACCGCCGA CACGGCGATG AGCTTTGGCG TGGACGCCAC CAACGTCGAG
CTTGCGACCG ACCTGTTCAC CGCGGAAGAC CTCTGGCAGC CCGAGCATCC CGGCGCCGCC
AAGTTCCTGG ACTTTCTCAA CGGCTGGGTG CTGCTCACCA ACGTGCTCAA CGAACTTTCG
CGCAGCATGG GCCAGCCCGA CTACTACCCC TTCGTGCTGC CGCGCGTGGC CGTCGGCAAG
CTGCAGTTCA TCCACTGCGT GATCACGCAG CAGCGCGACC GCGGCATGTC CGCAGCCGCG
TCGCCCGGCG TGCCGCTGCC GCCGGAGGCA AAAGCCCCCG CAGCTGCTTC CCAAGCGGCG
CCCGCGCCAG TACCGCAGGC CCAGAACCAG CAGCAGGGCG CCGCTCAGTC CTGA
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| Protein sequence | MNTPPDHASA PEPGAPSHLA SELAAPTVSR AYRCQCGRPV FLRNSQCLAC RTPLGYVIER
LGVVPLAPVE AEDKAEGGAA DGAEPEEQEQ LFTVFGNPDG RTYRRCANLM TAASCNWMVP
APREGDDPSF NTDGLAPGYC LACSVTRTIP DLSVESNGEL WRKLEHAKRR LISQLLALGL
PVVSRHADPV HGLAFDFLGN MPGGPHVMTG HEQGVITLNA EEAEDAVRER IRAEMREPYR
TLLGHFRHEV GHYYWDLLVQ PTPWLDGFRA LFGDERADYA AALQQHYEQG PPPDWANRFV
SSYASMHPWE DWAETWAHYL HMADTADTAM SFGVDATNVE LATDLFTAED LWQPEHPGAA
KFLDFLNGWV LLTNVLNELS RSMGQPDYYP FVLPRVAVGK LQFIHCVITQ QRDRGMSAAA
SPGVPLPPEA KAPAAASQAA PAPVPQAQNQ QQGAAQS
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