| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0436 |
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| Symbol | |
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| ID | 7970177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 477306 |
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| End bp | 478445 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791039 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002942365 |
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| Protein GI | 239813455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCA GAAGTTTTGT CGCCGGAACG GCGGTTTTCG CAGCGGGCCT GGCCCATCTC
TCGTCCGCGC AAGCGGCCGA ATCCGGGGTG ACCGACACCG AGATCGTGCT CGGCAGCTCG
GCCGTGCTGA GCGGCCCGCT CGGCTCGCAG ATCAAGGTGG TGCACAACGG CGCCGCGCTG
GCCTTCGACG CCATCAATGA GCAGGGTGGC GTGGGCGGAC GCAAGATCAA GCTGGTGGCG
CTGGACGACG AGCTCAAGCC CGAGAAGGCG GTCGAGAACT ACGCCAAGCT GCTGAACGAC
CACCGCGTGT TCGCGTTCTT CGGCTGCGTG GGCTCGGGCA CCACGGCCGC CGCGGCCAAG
CTGCTGCAGC AAAGCGGCGC GCCCAGCGTC GGCGGCTACG GCGTGGGCGA CAGTGCGCGC
GAACGCGTGG CGGGCTCGGC CTACTTCGTG CGCGCCAGCA ACGCACGCGA AGCGCAGGCG
CTGGTCGAGC ACCTGTCGAC CATCGGCGTG AACAAGATCG CGATCGCCCA CCTGGACAAT
CCCGGCGGCG TGGAGGCGGT GAAGCTGATC GAGGCGGCCA TGGCCACGAA CAAGCAGGCG
CCCGCGCTGG TGGTGTCGGT GAAGGGCGAC GGCTCGACCT CCGCGGCCGC CGGCAAGATG
CTGGCCGACA GCCAGTCCCA GGCCGTGCTG ATGTACCTGG CCGGCACGGT GGCCGGCGAG
GTGATCAAGG CGACCTATGC GGCCGGCAGC AAGCCGATGT TCTACGGCAT GTCGATCGTG
CCGGGCGAGG TCACGGCCAA GGTGGTGCAG CTGCAGGCCA GCGGCCTGGC CATCTCGCAG
GTCATGCCCT ACCCCTGGGG CGAGGTGGAA TCCGTCACGC GCGACTACCG CCGGCTGGCC
GAGCGCGCGC AGGTGCCGGT GGGCTACGGC AGCTTCGAGG GCTACCTGAA CGCGCTGGTG
ATGATCGAGG CGCTCAAGCG CACCGGCCGC GACCTGACGC GCGCGCGCCT GCATGCAACG
CTGCGGGCGT TCAGGCTGCG CCTGGCCGGC ATGGACATCG ACTTCTCGAC CGGCGCCAAT
GCCGGCTCGC GCTTCATCGA GATGGTGCGC GTCACGCCCG AAGGCCGCTT CGTGCGCTGA
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| Protein sequence | MQRRSFVAGT AVFAAGLAHL SSAQAAESGV TDTEIVLGSS AVLSGPLGSQ IKVVHNGAAL
AFDAINEQGG VGGRKIKLVA LDDELKPEKA VENYAKLLND HRVFAFFGCV GSGTTAAAAK
LLQQSGAPSV GGYGVGDSAR ERVAGSAYFV RASNAREAQA LVEHLSTIGV NKIAIAHLDN
PGGVEAVKLI EAAMATNKQA PALVVSVKGD GSTSAAAGKM LADSQSQAVL MYLAGTVAGE
VIKATYAAGS KPMFYGMSIV PGEVTAKVVQ LQASGLAISQ VMPYPWGEVE SVTRDYRRLA
ERAQVPVGYG SFEGYLNALV MIEALKRTGR DLTRARLHAT LRAFRLRLAG MDIDFSTGAN
AGSRFIEMVR VTPEGRFVR
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