Gene Vapar_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0430 
Symbol 
ID7970171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp469997 
End bp470437 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content67% 
IMG OID644791033 
Producthypothetical protein 
Protein accessionYP_002942359 
Protein GI239813449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.201945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGC CTGCTTCGCC CGATGCACCC CCATCGCCGC ATCCTTCCAC GCCCGCCGAG 
GTGGTCGACG AATTCCTTCG CCTCGTGATG ATTCCCGACC CGCAATCGGC GTCGCGCTTC
ACCGCGCCCG ACATCCGCAT CCGCTTCACC GGCAACCGCG AGATGCAGGC ACCCGGCGAC
ACCTCGGCCT TCAATGCGAA GCGCTACGCC TGGGTGAAGA AGAAGATCGA GCGCACCGAA
GTGGTGGCCG GCGGCACGCC CGAGGAAACC GTGGTCTACA GCCTCGGCAC GCTGTACGGC
GCCTGGCCCG ACGGCACTGC CTTCGAGGGC AACCGCTATG TCGACCGCTA CGTGGTGCGC
CACGGCCTCA TCAGCCGCAT GGACGTGTGG AACGACAGCG CCGAATGGCT GCTGGTGCGC
GCCGGGCTGG CGGTGCTGTG A
 
Protein sequence
MNTPASPDAP PSPHPSTPAE VVDEFLRLVM IPDPQSASRF TAPDIRIRFT GNREMQAPGD 
TSAFNAKRYA WVKKKIERTE VVAGGTPEET VVYSLGTLYG AWPDGTAFEG NRYVDRYVVR
HGLISRMDVW NDSAEWLLVR AGLAVL