| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0428 |
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| Symbol | |
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| ID | 7970169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 468238 |
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| End bp | 469005 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791031 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002942357 |
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| Protein GI | 239813447 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.65094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGTT CTTCTTCGCC GCCCAAGCCC GCCACCGCGC CGCGACCCAC CCGGCGCAAG
CTGCCGCCCA CCGGCGGCGC CGCGGCAAAG AACGAGGGCA ACGGCGACAT CGAGGAACGC
ATCTTCCGCT CGGTCTTCGA AAGCGTGGCC AGCCAGCGCC TCGCGCCCGG CACCAAGCTG
CCGGAGGCAT CGCTGTGCGA ACTGTTCGGC GTGAGCCGCG CGCTGGTGCG CAAGGTGCTG
CAGCGGCTCG CGCACGACCA CATCGTGGAA CTGCGGCCGA ACCGCGGCGC CATCGTCGCC
ATGCCCTCGC CCGAGGAGAC GCGGCAGATC TTCGAGGCGC GCCGCGCGCT CGAGGCCGCG
CTGGTGCGCA TGGCGGTGCG CAATGCCACG CGTGCCGAAG TCGCCGAGCT GCGGCGACAC
CTGAAGCAGG AGCATGCGGC GATGCACCGC TATGCGCAGC CCGAGTGGGC GCGCCTGGCC
AGCACCTTTC ACCTGCGCGT GGCGAAGCTC GCGCGCAATC CGATCCTGGA GCGCTACCTG
AGCGAGCTCA TGTCGCGCTG CTCGCTGATC GTGGCGCTCT ACGAGCCGCC CGGCAATGCA
TCGTGCGAAC ACGGCGAGCA TGCGGACGTG GTCGATGCCA TTGCGCGCGG CGATGCGGAC
GAGGCCGTGC GCCTGATGGA AGCGCACCTC CTGGTGCTCG AGAAGAACAT CGCGCTCGAC
CGGCCCGCTT CCGGGCGCAG CCTGGGCCAG ATGCTGGGAC TGGGCTGA
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| Protein sequence | MPRSSSPPKP ATAPRPTRRK LPPTGGAAAK NEGNGDIEER IFRSVFESVA SQRLAPGTKL
PEASLCELFG VSRALVRKVL QRLAHDHIVE LRPNRGAIVA MPSPEETRQI FEARRALEAA
LVRMAVRNAT RAEVAELRRH LKQEHAAMHR YAQPEWARLA STFHLRVAKL ARNPILERYL
SELMSRCSLI VALYEPPGNA SCEHGEHADV VDAIARGDAD EAVRLMEAHL LVLEKNIALD
RPASGRSLGQ MLGLG
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