| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0420 |
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| Symbol | |
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| ID | 7970161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 456769 |
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| End bp | 457848 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791023 |
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| Product | NAD/NADP octopine/nopaline dehydrogenase |
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| Protein accession | YP_002942349 |
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| Protein GI | 239813439 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTGAGC CTGCGGCAGG GCGCCTGCGC GTCGGCATCG CGGGCACCGG GGCGATCGCC
CTGGCAAGCG CGGCGTGGCT GCGCCAGGCG GGCCACGCCG CGATGCTCTG GTCGCCGGGC
GGCCAGGGTG CCGAGGCCCT GCGCACGCAG CCGCTCGAAG CCGCCGGCGT GCAGCCCTGC
CGCGTGGCGG TCGAGGTGGC CGGCGATGCG GCGCAACTTT GCCGCGCATC GGACGTGCTG
CTGATTGCCC TGCCGGTCAA CGGACACCGG CGCGTGATGG ATGCGCTGCT GCCCTTCCTG
CGTGATGGAC AGACCGTGAT CGTCAGCTCG ATGGCCTCGC TGTCGTCGCT CTATCTGCAC
GAAGGCGCAC GGCGGGCGGG CAAGCGGGTG ACGGTCGCGA GCTTCGGCAC CACGGTGCTG
ACCGCGCGCC GCGAATCCGC CACGCAGGTC AGGGTGATGA CGCGGCGCCA GGCGGTCGGT
GTGTCGGCGC TGCCGCGCAC GGAAATAGAG AGCGCCATCG AGCTGTGCGC CGCGCTGTTC
GGCGGCGGCT TCTTCGCGCA GGAGAACACG CTCGCCAGCG CGCTCGCGAA CGTCAACCCG
CAGTCGCACG GCCCGCTGGC CGTCTTCAAC TGGACGCGCA TCGAGCATGC CGAGAACTGG
CCGCAGTACC ACTGCATGAC GCCCGGCGTG GCCCGCGCGA TCGAGGCGCT GGACCGGGAG
CGGCGCGCCG TGGCCCAGGC CTTCGGCATC GCGCTCGGTC CCATCGAGGA GCATTTCGCG
CGCTCCTTCG GCACGGAATC GGCGCGGCTC GAGGACATCG CGGCCGAGCT GCATGCCAAG
CGCGGCGGGC CGCCCGGCCC CGTGCGCACC GACACGCGCT ACCTGAGCGA AGACATGCCC
TACGGCCTGG CCTTCGTGGA AGCGCTCGGC GCCATCGCCG GCGTGGCGAC ACCCGCGACG
CGCACCATCG TGGACGCCGC CTCGCTGGTC AGCGGCATCG ACTTCCGGCA GCAGAACGAC
CTGCTGGCGC CGCTGAATCT GGGCACTGAA ACCGTGGCCG GCCTGCTCGC CCGCCTATGA
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| Protein sequence | MTEPAAGRLR VGIAGTGAIA LASAAWLRQA GHAAMLWSPG GQGAEALRTQ PLEAAGVQPC
RVAVEVAGDA AQLCRASDVL LIALPVNGHR RVMDALLPFL RDGQTVIVSS MASLSSLYLH
EGARRAGKRV TVASFGTTVL TARRESATQV RVMTRRQAVG VSALPRTEIE SAIELCAALF
GGGFFAQENT LASALANVNP QSHGPLAVFN WTRIEHAENW PQYHCMTPGV ARAIEALDRE
RRAVAQAFGI ALGPIEEHFA RSFGTESARL EDIAAELHAK RGGPPGPVRT DTRYLSEDMP
YGLAFVEALG AIAGVATPAT RTIVDAASLV SGIDFRQQND LLAPLNLGTE TVAGLLARL
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