| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0409 |
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| Symbol | |
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| ID | 7970150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 441280 |
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| End bp | 441987 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791012 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_002942338 |
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| Protein GI | 239813428 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCC TCGAACTGCT GACCCAGGGC GACGGCGTGA GCCGCTCGGT GGCGGCGCTG
CTGCTTGCGA TGTCGATCGC CAGCTGGGTG GTGATTCTGT GGAAAGCCTG GCTGCTGCGC
GGCGGCACGC GCGACGTGCT GCGCAGCATT GCCGCGTTCT GGCAGTCGGC CACGCTCGCC
GATGCGCAGC AGCGCCTGCA GGCCTTCGAC CGCGCCATGC TGGTGGGGCC GGCCGTGAGC
GCCATCAGGA ATGCGGCAGC GACGGATGCA GGCGACGCCA CGCTCGGCGC CACCACCGGC
GACCGCAACC AGCGGCTCAC GCGGGCGCTG CGCGGCGCGC TGCATGGTGC GCTGCGGCGC
CTGCAGTCCG GCCAGATCCT GCTGGCCACC GTTGGCGCCA CGGCGCCCTT CGTGGGACTG
CTCGGCACGG TGTGGGGCAT CTACGGCGCG CTGTCGGGCA TCGCGGGCCA GACCGGCGGC
TTCACCATCG ACAAGGTGGC CGGACCGGTG GGCGAGGCGC TGGTGATGAC GGCCTTCGGC
CTGGCCGTGG CCATTCCGGC CGTGCTGGCC TACAACGTGT TCGGCCGCGT CATCGGCCGC
ATCGAAGCCG AGCTCGAGGG CTTTGCGCAC GACCTGCTCG GGAGCTTCGG CAGCCCGCCG
CCGCCGGCCG CGCCGCCGCC CGCGCGGCCC ATGCCGGTGT CGGCCTAG
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| Protein sequence | MSVLELLTQG DGVSRSVAAL LLAMSIASWV VILWKAWLLR GGTRDVLRSI AAFWQSATLA
DAQQRLQAFD RAMLVGPAVS AIRNAAATDA GDATLGATTG DRNQRLTRAL RGALHGALRR
LQSGQILLAT VGATAPFVGL LGTVWGIYGA LSGIAGQTGG FTIDKVAGPV GEALVMTAFG
LAVAIPAVLA YNVFGRVIGR IEAELEGFAH DLLGSFGSPP PPAAPPPARP MPVSA
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