| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0402 |
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| Symbol | |
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| ID | 7973546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 434761 |
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| End bp | 436899 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791005 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002942331 |
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| Protein GI | 239813421 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACCG CTGCGCTCCC CGCTTTTTCC GCCACGGGCA CTCCCCTCAC CACGGGTGCC
ACCCAGGCCG AGCGCCTCGC CGCGGCGCTC TCGGCGCTCA ACGACGAGCA GCGCGCCGCC
GTCGAGCACG GCGTCGGCAC GCTGACTGCC GGGCGCGACG AGCGGCCGCT GCTGGTGATC
GCCGGCGCGG GCTCGGGCAA GACCAGCACG CTGGCGCACC GGGTGGCGCA CCTCATCGCC
GGCGGCGTCG ATCTGCAGCG CCTGCTGCTT CTGACCTTCT CGCGCCGCGC GGCGCAGGAA
ATGGAGCGCC GCGCGGGCCA GGTGCTGGCG CGCGTGCTCG GGCTCAAGTC CGACAAGCCG
CCCGCGCTGC CCTGGGCCGG CACTTTCCAC GGCATCGGCG CGCGGCTGCT GCGCGAGTAC
GCCGCGCACA TCGGCCTGAA CGACCACTTC ACGATCCACG ACCGCGGCGA CGCCGAGGAC
CTGATGGGCT TGGTGCGCCA CGAGCTCGGC CTGTCGTCGA GCGTGAACCG CTTTCCGCGC
AAGGGCACCT GCCTTTCGAT CTATTCGCGC TGCGTCAACA CGCGCGCCCC GCTGGCCGAG
GTGCTGGCCG AGGCCTTTCC GTGGTGCGCC GAATGGGAAG CCGAACTCAA GCGCCTGTTT
GGCGCCTACG TCGAGGCCAA GCAGCAGCAG AACGTGCTCG ACTACGACGA CCTGCTGCTC
TACTGGGCCG GCATGGTGGC CGAGCCCGCG CTGGCGGCGC TGGTTGGCGA GCGCTTCGAC
CACGTGCTGG TCGACGAATA CCAGGACACC AACCTGCTGC AGGCCTCGAT CCTGCGGGCG
CTCAAGCCCG ACGGCCGCGG CGTGACGGTG GTGGGCGACG ATGCGCAGTC GATCTACTCG
TTTCGCGGCG CAACGGTGCG TAACATCCTC GACTTTCCGT CGCAGTTCTC GCAGGCTGCG
CGCGTGGTCA CGCTGGAGCG CAACTACCGC TCGACCCAGC CGATTCTCGA TGTCTCGAAC
CGGGTCATTG CACAGGCGGC CGAGCGGCAT GCCAAGACGC TGTGGACCGA CAAGCCCTCC
GCCGGCCGGC CGCAGCTGGT GCTGGTGCCC GACGAGGCGC AGCAGGCTGT CTGGGTGGCG
GACAAAGTGC TGGCGCACCG CGAGGGCGGC CTCGCGCTCA AGTCGCAGGC GGTGCTGTTC
CGCGCCGCCA CGCACAGCGC GCCGCTCGAG CTCGAACTGG CGCGCCGCAA CATCCCGTTC
GTGAAGTACG GCGGCCTCAA GTTTCTCGAG GCCTCGCATG TGAAGGACCT GCTCGCGGTG
CTGCGCTTCG CCGAGAACCC GCGCGGCCGC ATGGCGGGTT TCCGCGTCAC GCAGCTCATC
CCGGGCATCG GGCCGGCCAC GGGCGCGCGG CTGCTCGATG CCATGGACCA GGCCGCCGAT
CCGGCGGCGG CGGTGCGCGA ATTCGTGCCG CCCTCGGCCG CCCGCGAGGA GTGGGCGGTC
TTTGCCGAAG CCTATGCCGC GCTGTGCGCG CCCTCGCTGC CGTGGCCGGC CGATGTGGAA
CTGGCGGTGC GCTGGTATTT GCCGCACCTG GACCGGCTCT ACGACGACCC CTCCGGCGTG
CGGCGCGGCG ACGTCGAGCA GCTGGCGCGG CTGGCCTCGG GCTACGGCTC GCGCGAGCGC
TTCCTGACCG AACTCACGCT CGATCCGCCC GAAGCCACCA GCGACAAGCC GGGCCCGCCC
TCGCTCGACG AGGACTACCT CATTCTTTCG ACCATCCACT CGGCCAAGGG GCAGGAGTGG
AATTCGGTGC ACGTGCTCAA CGTGGTCGAC GGCTGCCTGC CGGCCGACGT GGCGCAGGGC
GCGCACGAAC TCGAGGAGGA GCGGCGGCTG CTCTACGTGG CGATGACGCG GGCGCGCGAC
CACCTGCATC TTCTGGTGCC GCAGCGCTTC TACGTGACGC AGCAGGCCGT GCGCGGCGAC
CGGCACCTGT ATGCCAACCG CACGCGCTTC ATTTCCGAAT CGGATCTTGC CGGCTTCGAG
CAGCAGACCT GGCCGCCGCC GCCGGCGCGC CCGCCCGCAG TGCCGCCGCC GGCCGCGGTG
ATCGACCTGC GCAACCGCAT GCGCGCGGCC TGGAGCTGA
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| Protein sequence | MQTAALPAFS ATGTPLTTGA TQAERLAAAL SALNDEQRAA VEHGVGTLTA GRDERPLLVI
AGAGSGKTST LAHRVAHLIA GGVDLQRLLL LTFSRRAAQE MERRAGQVLA RVLGLKSDKP
PALPWAGTFH GIGARLLREY AAHIGLNDHF TIHDRGDAED LMGLVRHELG LSSSVNRFPR
KGTCLSIYSR CVNTRAPLAE VLAEAFPWCA EWEAELKRLF GAYVEAKQQQ NVLDYDDLLL
YWAGMVAEPA LAALVGERFD HVLVDEYQDT NLLQASILRA LKPDGRGVTV VGDDAQSIYS
FRGATVRNIL DFPSQFSQAA RVVTLERNYR STQPILDVSN RVIAQAAERH AKTLWTDKPS
AGRPQLVLVP DEAQQAVWVA DKVLAHREGG LALKSQAVLF RAATHSAPLE LELARRNIPF
VKYGGLKFLE ASHVKDLLAV LRFAENPRGR MAGFRVTQLI PGIGPATGAR LLDAMDQAAD
PAAAVREFVP PSAAREEWAV FAEAYAALCA PSLPWPADVE LAVRWYLPHL DRLYDDPSGV
RRGDVEQLAR LASGYGSRER FLTELTLDPP EATSDKPGPP SLDEDYLILS TIHSAKGQEW
NSVHVLNVVD GCLPADVAQG AHELEEERRL LYVAMTRARD HLHLLVPQRF YVTQQAVRGD
RHLYANRTRF ISESDLAGFE QQTWPPPPAR PPAVPPPAAV IDLRNRMRAA WS
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