| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0400 |
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| Symbol | |
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| ID | 7973544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 432787 |
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| End bp | 433569 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791003 |
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| Product | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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| Protein accession | YP_002942329 |
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| Protein GI | 239813419 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC CCGTTGCCAT CGTCGCGGCG ATGCACGAGG AGCTGGGCGC GCTGCTCGCG
CAGATGCCGG ACGAGCAGCG CGTGCGCGCC GCGGGGCGCG ATTTCTGGGT CGGCCACCTG
CACGGCCAGC CGGTGGTGGC CGTGCTGTCG CGCATCGGCA AGGTCGCGGC GGCGGTCACG
GCCACGGTGC TGCTCGAGCG CTTCGGCGTG CGCGCGATCG TGTTCACGGG CGTGGCAGGC
GGGCTCGCGC CGGGCGTGGA CGTTGGCGAC GTGGTGGTCG CCACGCAACT GCTGCAGCAC
GACCTCGACG CCTCGCCGAT CTTCCCGAAG TACGAAGTGC CGCTCATGGG CCTTTCGCGC
TTTGCGGCCG ATGCCTCGAT CGGCGATGCG CTGGCGGCCG TGGCCGAAGC CGCGCTGCGC
GATCCGGTGG CGCTGGTGGG GCAGGCGGCC GCGGATGAAT TCGGCCTCCG GTCGCCGAAG
GTGCACCGCG GCCTGCTGGT GAGCGGCGAC CGCTTCGTCT CGACGGCCGC CGAGAGCGCT
GCCTTGCGGC GCAGCCTGCC CGATGCGCTC GCGGTCGAGA TGGAAGGCGC GGCGGTCGCG
CAGGTGTGCC ACGACTATGG CGTGCCGTTC GCGGCCATGC GCACCATCTC GGACCGCGCC
GACGACGCCG CGCATGGCGA CTTCGCGCGC TTCGTCGCCG AGGTGGCGAG CCGCTACAGC
CTGGCCTTGG TCGATGCGTG GCTGGCCACG CTGCCTCCTC GCGGAATGCC GGCCGCTACT
TGA
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| Protein sequence | MNAPVAIVAA MHEELGALLA QMPDEQRVRA AGRDFWVGHL HGQPVVAVLS RIGKVAAAVT
ATVLLERFGV RAIVFTGVAG GLAPGVDVGD VVVATQLLQH DLDASPIFPK YEVPLMGLSR
FAADASIGDA LAAVAEAALR DPVALVGQAA ADEFGLRSPK VHRGLLVSGD RFVSTAAESA
ALRRSLPDAL AVEMEGAAVA QVCHDYGVPF AAMRTISDRA DDAAHGDFAR FVAEVASRYS
LALVDAWLAT LPPRGMPAAT
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