| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0397 |
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| Symbol | |
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| ID | 7973541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 429032 |
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| End bp | 430069 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791000 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_002942326 |
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| Protein GI | 239813416 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGC TGCTGGACAT CAAGGATCTG CACGTCGAGT TTCCGACGCA AGGCGGCGTG
CTGCATGCGG TCGACGGCGT GAGCCTCAGG CTGGAGGAGG GCGAGGTGCT CGGCATCGTC
GGCGAATCGG GCTCGGGCAA GAGCGTGACG ATGATGGCGC TGATGGGCCT CGTGGGCTTT
CCGGGCCGGG TGCGCGCGCA GCACATGCGC TTTGCGGGCA AGGAGCTGCT CGGCATCTCC
GACAAGGCGC GCCGCGCGCT GGTCGGCAAG GAGGTGGCCA TGATCTTCCA GGAGCCGACC
ACCAGCCTCA ATCCCTGCTT CACCATCGGC TTCCAGCTGA TGGAAACGCT GCGGCTGCAC
CTTCATCTGG ACCGGCGCAC GGCGAAGAAG CGCGCGACCG AGCTGCTCGA GCAGGTCGGC
ATACCGGCCG CGTCGTCGCG CCTGGGCAGC TATCCGCACC AGCTCTCGGG CGGCATGAAC
CAGCGCGTGA TGATCGCGAT GGCCATTGCC TGCAACCCGC GCCTCCTGAT CGCCGACGAG
CCGACCACCG CGCTCGACGT GACGATCCAG GCGCAGATCC TCGACCTGCT GCGCGAGCTG
CAGAAGGAGC GCGGCATGGC GCTGGTGCTC ATCACGCACA ACATGGGCGT GGTCAGCGAG
ATGGCGCAGC GCATCGCCGT GATGTATGCG GGCCAGGTGA TGGAGCAGCA GCGCGTCGAC
CGGCTCTTCG CGGATCCGCA GCATCCCTAC ACCGAGGCCC TGCTGGCCGC GCTGCCCGAA
CGCGCCGCGC CCGAGGGGCG GCTGGCCACC ATCGCGGGCG TGGTGCCGGG CGTGCACGAC
CGGCCGGCCG GCTGCCTGTT CGCGCCGCGC TGCAGCTACG TGACGACGAA GGCCTGCAAC
GTGCGGCCGG CGCTGCGCGA GGTCGAGTCG CCGCCCGGCG CCGAGGTGCG CTGCCATTTC
CCGCTCGGCG AGCCCGGGCG CATGGCGGCC ATCGAGGCCG ACCGGCCGCG GCCGCAGGCC
GCGGAGGCGC TGCCATGA
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| Protein sequence | MNMLLDIKDL HVEFPTQGGV LHAVDGVSLR LEEGEVLGIV GESGSGKSVT MMALMGLVGF
PGRVRAQHMR FAGKELLGIS DKARRALVGK EVAMIFQEPT TSLNPCFTIG FQLMETLRLH
LHLDRRTAKK RATELLEQVG IPAASSRLGS YPHQLSGGMN QRVMIAMAIA CNPRLLIADE
PTTALDVTIQ AQILDLLREL QKERGMALVL ITHNMGVVSE MAQRIAVMYA GQVMEQQRVD
RLFADPQHPY TEALLAALPE RAAPEGRLAT IAGVVPGVHD RPAGCLFAPR CSYVTTKACN
VRPALREVES PPGAEVRCHF PLGEPGRMAA IEADRPRPQA AEALP
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