| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0391 |
|---|
| Symbol | |
|---|
| ID | 7973535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 422363 |
|---|
| End bp | 423493 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644790994 |
|---|
| Product | NAD(P)(+) transhydrogenase (AB-specific) |
|---|
| Protein accession | YP_002942320 |
|---|
| Protein GI | 239813410 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.702233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATAG GCGTGCCTGC CGAGACAATG GCCGGCGAAA CCCGCGTGGC CGTAACGCCC
GAGACGGTGA AGAAACTGGC CGCTTCCGGG CACACCGTGC GCGTGCAGTC CGGGGCCGGC
ATTGCCGCCA GCGTCACCGA TGCCGCCTAC GAGGCCGCCG GTGCCGAGAT CGTCAACATG
AACGCCGCCT TCGCGGCCGA CATGGTGCTC AAGGTGCGCA CCCCCAGCGA TGCCGAAACC
GCGCTCATGA AGCCCGGCAC CGTGGTCATC GGCATGCTCA ACCCCTTCGA TGCGGCCGGC
CTGCAGCGCC TGGCCACGGC CGGCCTCACG GCCTTCGCGC TCGAAGCCGC CCCGCGCACC
ACCCGCGCCC AGAGCATGGA CGTGCTCAGC TCGCAGGCCA ACATCGCCGG CTACAAGGCC
GTGATCATCG CGGCCGACAA GTACCAGCGC TTCTTCCCCA TGCTCATGAC CGCCGCCGGC
ACCGTGAAGG CCGCGCGCGT GGTCATCCTG GGCGTGGGCG TGGCCGGCCT GCAGGCCATT
GCCACCGCCA AGCGCCTGGG GGCGGTGATC GAGGCCTCCG ACGTGCGCCC GAGCGTCAAG
GAGCAGATCG AGTCGCTCGG CGGCAAGTTC ATCGAGGTGT CCTACGACAC CGACGAAGAA
AAGGAAGCCG CGGTCGGCGT CGGCGGCTAC GCCCGGCCCA TGCCCCCGAG CTGGCTCGCG
CGCCAGCAGG TCGAAGTGGC CAAGCGCGTG GCGCTGGCCG ACATCGTCAT CAGCACCGCG
CTCATTCCCG GACGCGCCGC GCCCACGCTC ATCACCGAGG ACATGGTCAA GGCCATGAAG
CCCGGCTCGG TGATCGTCGA CATCGCGGCC GGCAAGGGCG CGGACGGCAT CGGCGGCAAC
TGCCCGCTGT CGGAGGCCGA CAAGACGGTG GTCAAGCACG GCGTGACCAT CGTCGGCGAA
ACCAACCTGC CGGCGCTGGT GGCGGCCGAC GCGTCGGCGC TCTATGCGCG CAACGTGCTC
GACTTCCTCA AGCTGATCGT CACCAAGGAG GGCGGCCTGA AGATCGACCT CGAGGACGAC
ATCGTCGCCG CCTGCCGCGT CGCGCAGGAC GGCCAGGTCA CGAAGCCATA A
|
|---|
| Protein sequence | MLIGVPAETM AGETRVAVTP ETVKKLAASG HTVRVQSGAG IAASVTDAAY EAAGAEIVNM
NAAFAADMVL KVRTPSDAET ALMKPGTVVI GMLNPFDAAG LQRLATAGLT AFALEAAPRT
TRAQSMDVLS SQANIAGYKA VIIAADKYQR FFPMLMTAAG TVKAARVVIL GVGVAGLQAI
ATAKRLGAVI EASDVRPSVK EQIESLGGKF IEVSYDTDEE KEAAVGVGGY ARPMPPSWLA
RQQVEVAKRV ALADIVISTA LIPGRAAPTL ITEDMVKAMK PGSVIVDIAA GKGADGIGGN
CPLSEADKTV VKHGVTIVGE TNLPALVAAD ASALYARNVL DFLKLIVTKE GGLKIDLEDD
IVAACRVAQD GQVTKP
|
|---|
| |