| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0377 |
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| Symbol | |
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| ID | 7973521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 408240 |
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| End bp | 409130 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790980 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002942306 |
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| Protein GI | 239813396 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCCT TCACGCCGCG CCAGTTCCTC CTGCTCGTTC TCCTCACGCT TGCATGGGGC
CTCAACTGGC CCGTGATGAA GCTCGGCGTG GCGGACTATC CGCCGCTGGC CTTCCGCGCG
ATCTCGATCT GGCTCGGCGT GCCGGTGCTG GGGCTTGCGC TGGCGTGGAT GAAGGTGCCG
TTCCACGTGC CGCGCCGCGC ATGGCCCGAA CTGGTGTGGC TGGGCGCCAC CAACATGTTC
ATCTGGCACG CCTGCATCAT CCTCGCGGTG AAGGCGCTCT CGGGCGGGCG CGCGGCGATC
CTGGGCTACA CGATGCCGGT GTTCTCGGCG GTGATCGGCG CGCTGCTGTT CTCGGCCGTG
CTCACGCGGC GCTCATGGGT GGGCGTGGGC GCCTGCGCGG TCGGCGTGGG GCTTTTGCTG
TGGCACGAGC TCACCGACCT GGCGGGGCGG CCCGGCTACG TGGCGCTCGC ACTGGTGGCG
GCCGCGACAT GGGCGCTGGG CACGCAGCTG CTGCGCCACT CGCGCATCGG ACTGCCGACG
CTCACGCTCT CGTTCTGGAT GACGGCGATG ACGGCCGTGG TGATGACGGT GCTGTCGCTG
CTGTTCGAGC GCGGCCCATG GCGCTGGCCC GGTCCCGTGA CCTGGGGCTC GATCGCCTAC
AACGCGGTGC TGATCTTCGG CTTTGCGCAT GCGGCATGGT TCTACCTGGC GCGCGGCCTG
CCGCCGGTGG CCTCGACCCT GAGCGTGATG TTCATCCCGG TACTGGGCGT GTTCAGCGGC
GCGGTGTGGC TCGGCGAAGT GGTGCACTGG CAGGACTGGG TGGCCGTCGC GCTGATGATG
GTGGCCATTG CCTCGGTGCT CTGGCCCTCG CGCAGCGCCG CCAAGGCCTG A
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| Protein sequence | MPSFTPRQFL LLVLLTLAWG LNWPVMKLGV ADYPPLAFRA ISIWLGVPVL GLALAWMKVP
FHVPRRAWPE LVWLGATNMF IWHACIILAV KALSGGRAAI LGYTMPVFSA VIGALLFSAV
LTRRSWVGVG ACAVGVGLLL WHELTDLAGR PGYVALALVA AATWALGTQL LRHSRIGLPT
LTLSFWMTAM TAVVMTVLSL LFERGPWRWP GPVTWGSIAY NAVLIFGFAH AAWFYLARGL
PPVASTLSVM FIPVLGVFSG AVWLGEVVHW QDWVAVALMM VAIASVLWPS RSAAKA
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