| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0372 |
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| Symbol | |
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| ID | 7973516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 401477 |
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| End bp | 403006 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790975 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942301 |
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| Protein GI | 239813391 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCTG TGGGCTCTTC TGCATTGCTC GAACTGCGCG GCATCAGCAA GCGCTTCGGC
GCTTCGCGCG CACTCTCGGG CGTGGACTTC TCGCTGCATG CGGGCGAGAT CCACGCCCTG
TGCGGCGAGA ACGGCGCGGG CAAGTCGACG CTGATGAACA TCATCGACGG CATCCACCGC
CCCGACGAAG GCGACATCCT GCTGAACGGC CAGAAGGTGG TGATCGACGG CCCGGCGCAC
GCGATGCGCC TGGGCATCGG CCTGGTGCAC CAGGAGATCG CGCTGTGCGC CGACGCCACT
GTGGCCGAGA ACATCTTCAT GCCGGAGATC AACGCCGGCC GGCAGGCCTG GATGAACTAC
GCCAGCCTGA ACGCGCGCGC CGCCCAGGTG CTGGCGCGGC TCGGGCAGGA CATCGCTCCC
GCCACGCCGG TGCGAGAGCT GAGCATCTCG AGCCAGCAGC TGGTGGAGAT TGCCAAGGCG
CTCACGCTGG ACTGCAAGGT GCTGATCCTC GACGAGCCCA CGGCGGCGCT CACCGACAAC
GAATCGGCCG CGCTCTTTCG CGTGCTGCAC GACCTGAAGG CGCAGGGCAT CGGCATCATC
TACATCAGCC ACCGCATGGC TGAAATATTC ACGCACTGCG ACCGCGTCAC GGTGCTGCGC
GACGGGCGCA ACGTGCATTG CGGACCGCTC GCCGGCCTGA GCGCCGACGA GCTGGTGCGC
CGCATGGTGG GGCGCGACCT CGGCAACTAC TACCCGCCCA AGCAAGAGGC CACCGAATCG
TCCGGGCCGG TGCTCGAGGC GGTGGACATC GCCGATGGCG AGCGCGTGCA CGGCATCTCG
TTTGCGCTCC AGCGCGGCGA GATCCTCGGC ATTGCCGGGC TCATGGGTGC CGGCCGCAGC
GAACTGGCCG AGACCATTTG CGGCCTGCGC CCCGCCACGC GCGGCACGCT GCGCCTGCAC
GGCAGGGCGC TTGCGATCCG CAAGTACAGC GATGCGCTGC GCGAAGGCAT CGCCTACCTC
AGCGAAGACC GCAAGGCGGC AGGCGTGTAC CTGGACCTGC CGATCGCGCA GAACATCTCG
TCGATGGCGC TGCGGCGCGT GAGCTCCGGC TGGGGCCTGT TGCAGCGCGC GGCCGAACAC
CGCCTGGCCC GCGAGCTGGG CGCCAGGCTC AAGCTCAAGT CGGACGGCGT GGCCATCGAG
GTGTCGAGCC TGTCGGGCGG CAACCAGCAG AAGGTGGCGA TTGCCAAGCT GCTGGCCACC
AACCCCGTGG TGCTGCTGAT GGACGAGCCC ACGCGCGGGG TGGACGTGGG CGCCAAGTCG
GAGATCCACC ACATCCTGCG CGAGCTCGCG AACCAGGGCG TGGGCGTGAT CGTGATCTCT
TCGGAGCTGC CCGAGATCAT CGGCCTGTGC GACCGGGCGC TGGTGATCCG CGACGGCCGG
CTGGCCGGCG AATTGAATTC CAACGACATG ACGGAGGAGG CCCTCTTGCG GCTTGCCTCC
GGACTCTGCG AACAGGAGGA GATGGCATGA
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| Protein sequence | MSAVGSSALL ELRGISKRFG ASRALSGVDF SLHAGEIHAL CGENGAGKST LMNIIDGIHR
PDEGDILLNG QKVVIDGPAH AMRLGIGLVH QEIALCADAT VAENIFMPEI NAGRQAWMNY
ASLNARAAQV LARLGQDIAP ATPVRELSIS SQQLVEIAKA LTLDCKVLIL DEPTAALTDN
ESAALFRVLH DLKAQGIGII YISHRMAEIF THCDRVTVLR DGRNVHCGPL AGLSADELVR
RMVGRDLGNY YPPKQEATES SGPVLEAVDI ADGERVHGIS FALQRGEILG IAGLMGAGRS
ELAETICGLR PATRGTLRLH GRALAIRKYS DALREGIAYL SEDRKAAGVY LDLPIAQNIS
SMALRRVSSG WGLLQRAAEH RLARELGARL KLKSDGVAIE VSSLSGGNQQ KVAIAKLLAT
NPVVLLMDEP TRGVDVGAKS EIHHILRELA NQGVGVIVIS SELPEIIGLC DRALVIRDGR
LAGELNSNDM TEEALLRLAS GLCEQEEMA
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