| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0365 |
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| Symbol | |
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| ID | 7973509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 390873 |
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| End bp | 391793 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790968 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002942294 |
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| Protein GI | 239813384 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGCA TCCTCGTTCT CGAGCAGCTG CTCAACGGCC TCGGCTATGG GCTGATGCTG
TTCCTGCTGG CAGCGGGGCT CACGCTGGTG TTCGGCATCA TGGACGTGCT GAACCTCGCG
CATGGCTCGC TCTTCATGTC GGGCGCGTAC GTGGCGGCCG AGGCGCACAC GCGCACCGGT
TCGTTCACGG CAGCCATCGT GATCGCGGTG GCGGTCACGG TGGTGGTGGC GCTGCTGCTC
GAGGTGCTGC TGATGCGCCG CCTCTACACG CGCGACCACC TGGCGCAGGT GCTGGCCACC
TTCGGCGTGA TCCTGGTGGC CGACGACATC GTCAAGATGG CCTGGGGCCC GTCGCCGGTG
ATGGCGCCGA CGCCGGCCGC GCTGTCGGGG CCCATCGATC TGGTGGACGG CCTGCCCTAC
CCGTCCTACC GCCTCGTGAT CCTCGCGGGC GGGCTGCTGG TGGCGCTTGC GCTCTACCTC
CTGGTCAACC ACACGCGCAT CGGCATGCGG GTGCGCGCGG GCGCGTCCGA CCGGCCGATG
GCGGAGCTGA TGGGCGTGCG CGTGGGCCGC ATCTTCAACG GCGTGTTTTT GCTCGGCGCG
GCGCTGGCCG CGCTGGCCGG CGCGCTGATG GGGCCGATCG TCGCGGTGCA GGTCGGCATG
GGCGAGGCGA TCCTGATTCC GGCGCTGGTG GTGCTGGTGA TCGGCGGCAT CGGTTCGGTG
CGCGGCGCCT TCGTGGCCGC ACTGATGGTG GGCGTGGTCG ACACGGTCGG ACGCGCCTTC
GTGCCAATGC TGCTGCGCGC CACGCTGCCG CCGGCCACGG CCGCCGACTT GGGCCCGCTG
TTCGCCGAAG TCGCGATGTA CGCGCTGATG GTCGTCGTTT TGATCTTCCG GCCCTCCGGC
CTTTTCTCCG CCCGGTCATG A
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| Protein sequence | MSGILVLEQL LNGLGYGLML FLLAAGLTLV FGIMDVLNLA HGSLFMSGAY VAAEAHTRTG
SFTAAIVIAV AVTVVVALLL EVLLMRRLYT RDHLAQVLAT FGVILVADDI VKMAWGPSPV
MAPTPAALSG PIDLVDGLPY PSYRLVILAG GLLVALALYL LVNHTRIGMR VRAGASDRPM
AELMGVRVGR IFNGVFLLGA ALAALAGALM GPIVAVQVGM GEAILIPALV VLVIGGIGSV
RGAFVAALMV GVVDTVGRAF VPMLLRATLP PATAADLGPL FAEVAMYALM VVVLIFRPSG
LFSARS
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