| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0364 |
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| Symbol | |
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| ID | 7973508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 389893 |
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| End bp | 390876 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790967 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002942293 |
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| Protein GI | 239813383 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTGT CCTCACGCTC TCTCGGCCTC GGGCTGCTCC TCCTCCTGCT GCTCGCGGCC
TTTCCGCTGG TCGCGCCGCT GTTCGGGCTC GAGTTCTACA TCGGCTTCGT GCGGCGCGTG
CTCGTGGTGG CGCTGGCGGC TGCCAGCCTC AACTTCATCC TGGGCTTCGG CGGCATGGTG
GCGCTCGGGC ATGCGGGCTT CATCGGCATG GGCGCCTACA CGGTGGTGGC GCTCAGCGAT
GCGGGCGTGG TGTCCGCATG GGTGATGTGG CCGCTGGCCG CGCTGGTGGC CGGCCTCGTC
GCGGCGCTGA TCGGCACGGT GGCGCTGCGC ACGCGCGGCG TCTACTTCAT CATGACCACG
CTGGCCGTTG CGCAGATGCT GTACTTCGTG GTGGTTTCGC TGCGCCGCTA TGGCGGCGAC
GACGGCTACA CGCTGATGAG CCGGCCCACG CTGCTGCCAG GCCTCGACCT GGGCAACGAA
TCGAACTTCT ACTGGGTGGT GCTGGCCATC GTGGCGCTCG CGCTCTGGTG GCTGCACCGC
GCGACGCAAT CGCGCTTCGG CCATGCGCTG ATGGGCATCC GCGACAACGA GACGCGCATG
CGGGCACTGG GCTACCCGGT GTTCAAGCTG CAGCTCGTCG CCTTTGCCAT CGCTGGTGCC
ATCGCGGGGC TGGCCGGCGC GCTGCTCGCG GGCGGCAATG GCTTCGTGAG CCCGGCGACG
ATGCACTGGA CGCAGTCGGC CACGCTGCTG GTGATGGTGG TGATCGGTGG ACTGGGACGC
AGCTGGGGCG GGCCGGTAGG CGCCGTGGTC TGGCTGGTGC TCGAGGAAGC GTTGAAGCAG
CACACGGAGC ATTGGCACAT GCCGCTCGGG TTGCTGTTGA TTGCTGTTGC GTTGTGGGCG
CCTAAAGGGC TCGCAGCTTT GTACAAGCGC CGCTTGCCCC TCACCCCCAC CCTCTCCCCA
GAGGGGCGAG GGAGTAAAGC ATGA
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| Protein sequence | MKLSSRSLGL GLLLLLLLAA FPLVAPLFGL EFYIGFVRRV LVVALAAASL NFILGFGGMV
ALGHAGFIGM GAYTVVALSD AGVVSAWVMW PLAALVAGLV AALIGTVALR TRGVYFIMTT
LAVAQMLYFV VVSLRRYGGD DGYTLMSRPT LLPGLDLGNE SNFYWVVLAI VALALWWLHR
ATQSRFGHAL MGIRDNETRM RALGYPVFKL QLVAFAIAGA IAGLAGALLA GGNGFVSPAT
MHWTQSATLL VMVVIGGLGR SWGGPVGAVV WLVLEEALKQ HTEHWHMPLG LLLIAVALWA
PKGLAALYKR RLPLTPTLSP EGRGSKA
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