| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0360 |
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| Symbol | |
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| ID | 7973504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 387034 |
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| End bp | 387747 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790963 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002942289 |
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| Protein GI | 239813379 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCCG AAGCACAGAA AAAAGTAGCC ATCGTCACCG CCGGTGGCAG CGGCATGGGC
GCGGCTGCGG CGCGCAAGCT CGCGGATGAC GGTTTTCGCG TCGCCATCCT TTCGTCATCG
GGCAAGGGCG AGGCGCTCGC CGCCGAGCTT GGCGGCATCG GCGTGACCGG CTCCAACCAA
TCGAACGACG ACATCAAACG GCTGGTCGAC AAGGTGACCG ACACATGGGG CCGCGTCGAC
GTGCTCGTCA ACAGCGCGGG CCATGGTCCG CGCGCGCCGA TCCTCGACAT CACCGACGAA
GACTGGCACC GCGGCATGGA CGTCTACCTG CTGAGCGCGG TGCGCCCCGC GCGGCTGGTG
GCACCGCTCA TGGTCAAGCA GGGCGGCGGC TCGATCATCA ACATCTCGAC CTTCGCCGCC
TTCGAGCCCG ACCCCGTGTT CCCGACCTCG GGCGTGTTCC GCGCCGGCCT CGCGGCCTTC
ACCAAGCTCT TCGCCGACAA ATACGCCGCG CAGAACGTGC GCATGAACAA CGTGCTGCCC
GGCTTCATCG ACAGCCTGCC CGAGAAGGCC GAGTTCCGCT CGCGTATTCC GATGGGCCGC
TACGGCAAGA GCAGCGAGAT CGCGGCCGTG ATCGGCTTTC TCGCATCCGA AGGCGCGGGC
TACATCACGG GGCAGAACCT GCGCGTGGAT GGCGGCATCA CGCGCTCGGT GTAG
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| Protein sequence | MSSEAQKKVA IVTAGGSGMG AAAARKLADD GFRVAILSSS GKGEALAAEL GGIGVTGSNQ
SNDDIKRLVD KVTDTWGRVD VLVNSAGHGP RAPILDITDE DWHRGMDVYL LSAVRPARLV
APLMVKQGGG SIINISTFAA FEPDPVFPTS GVFRAGLAAF TKLFADKYAA QNVRMNNVLP
GFIDSLPEKA EFRSRIPMGR YGKSSEIAAV IGFLASEGAG YITGQNLRVD GGITRSV
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