| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0359 |
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| Symbol | |
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| ID | 7973503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 385793 |
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| End bp | 386671 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790962 |
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| Product | Choloyl-CoA hydrolase |
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| Protein accession | YP_002942288 |
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| Protein GI | 239813378 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG ATCCCGCCAC CGCCGCCCGC CTTGTCGCCG AACTCGTCGC GCTCATGCAG
CTCGAGCCGC TCGGAGGCGA CAAATTCCTG GCCCAGAGCG AAGACATCGG CACGCCCGCC
GTGTTCGGCG GCCAGGTGCT CGGCCAGTCG CTCGCGGCCG CGAGCCTCAC GGTGGGCGCC
GACCGGCCGG TGCATTCGAT GCACGCCTAC TTCCTGCTGC CGGGCGAGCA TGCACCCATC
GAATACAGCG TGGACCGCGT GCGCGACGGC CGCAGCTTCA CCACGCGGCA CGTGGTGGCG
CGCCAGCAGG AGCGCATCAT CTTCGAGATG TCGGCCTCGT TCCAGACGGT GGACGACGGC
GTCGAGCACC AGTTCGCCAT GCCCGCAGTG GAGGGCCCCG AGGGCCTCGC GAGCGAACTC
GACCAGCGCC TCGCGCTCGG CGAGCGGCTG CCCGAACGCT GGCGCATCAA GGGCCTGGAG
CCGCACGGCA TCGAATACCG CGGTGTCGAG GCCGACGACC TGCTGGCGCC GGCGGTGCGC
TCGTCCGAAA GCGCGATCTG GATGCGCGCC ATCGCGCCGC TGCCCGACGA CCCGGTGGTG
CACCGCGCGC TGCTGGCCTA CGCCTCCGAC CACGGCCTGC TGCGCGCCGC GATGCTGCCG
CACGGCCTGA GCTTCATGAG CGGCCAGGTG CGCCCCGCGA GCCTCGACCA CGCGATGTGG
TTCCACCGCG ATTTCCGCAT GGACGACTGG CTGCTCTACG TGCTCGATTC GCCCAGCGCG
AGCGGCGCGC GCGGCCTGTG CCGCGGCAGC CTGTTCACGC GCGACGGGCG GTTGGTGGCT
TCTACGGCGC AAGAGGGAAT GCTGCGGGTC AAGCGCTGA
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| Protein sequence | MTTDPATAAR LVAELVALMQ LEPLGGDKFL AQSEDIGTPA VFGGQVLGQS LAAASLTVGA
DRPVHSMHAY FLLPGEHAPI EYSVDRVRDG RSFTTRHVVA RQQERIIFEM SASFQTVDDG
VEHQFAMPAV EGPEGLASEL DQRLALGERL PERWRIKGLE PHGIEYRGVE ADDLLAPAVR
SSESAIWMRA IAPLPDDPVV HRALLAYASD HGLLRAAMLP HGLSFMSGQV RPASLDHAMW
FHRDFRMDDW LLYVLDSPSA SGARGLCRGS LFTRDGRLVA STAQEGMLRV KR
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