Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0346 |
Symbol | |
ID | 7973490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 373642 |
End bp | 374880 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644790949 |
Product | Formyl-CoA transferase |
Protein accession | YP_002942275 |
Protein GI | 239813365 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACA CCTCTTCTTC TCCCCCGGCC GCGGGCCCGC TGGCCGGCCT CAAGGTCGTC GAGCTCGGGC AGCTGATCGC CGGGCCTTTC GCGGCGCGCA CGCTGGCCGA CTTCGGCGCC GAGGTCATCA AGATCGAGCC GCCGGGCGCG GGCGATCCGC TGCGCACCTG GCGGCTCTTG AAGGACGGCA CCTCGGTGTG GTGGCAGGTG CAGTCGCGCA ACAAGCGTTC GCTCGCGCTC GACCTGCGCC AGGCCGAGGC GCAGGCCGTG GTGCGCCAGC TGGCCGCCGA GGCCGACGTG CTGGTCGAGA ACTTCCGCCC CGGCGCGATG GAAGGCTGGG GCCTCGGACC CGGCGAGCTG CTGGCCGCCA ACCCCGCGCT CGTGATGCTG CGCATCAGCG GCTACGGCCA GACCGGCCCC TACCGCGACC GGCCGGGCTT CGGCGTGGTG GCCGAGGCCA TGGGCGGGCT GCGCCACCTC ACGGGCGAGC CCGGCCGCGT GCCGGTGCGC GTGGGCGTTT CGATCGGCGA CACGCTGGCC TCGCTGCACG GCGTGATCGG CGTGCTGATG GCGATGCAGC ACCGCCATGC CACCGTCAGC GCCGAGTATC CGAAGGGCCG GGGCCAGGTG GTCGACGTGG CGCTCTACGA GGCGGTCTTC AACTGCATGG AGAGCTTGCT GCCCGAGTAC AGCGCGTTCG GCGCGGTGCG CGAGGCGGCC GGCAGCGCGC TGCCCGGCAT CGCGCCGACC AACGCCTACC GCTGCGCCGA CGGCGGCTAC GCCATCGTCG CGGGCAACGG CGACAGCATC TTCCGCCGGC TGATGGCGTG CATCGGCCGG CCCGACCTCG CGGCCGATCC GTCATTGGCT GGCAACACGG GCCGGGTGGC GCAGGTGGAA ATGCTCGACG CCGCCATCGG CGAGTGGACG GCAGCGCGCA CGGTGGACGA GGTGCTGGCC GCGCTCGATG CGGCGCAGGT GCCGGCCGGC CGCATCTACA CCATTGCCGA CATCGCGGCC GACTCGCACT ACGCCGCGCG CGGCATGCTG CAGCAGGTGC ACATGCCGGA CGGCAGCACG CTCGCGGTGC CCGGCTTCGT GCCCAAGCTC TCGCTCACGC CGGCCAGCCA CCGGCGCAGC GCGCCCGCGC TGGGCGCGGA CACCGATGCG GTCCTGAAGG AGATCGGCCT GAACGCCGAG CAGATCGCCG CGCTGCATGC GCGCGGGATC GTCGGCTGA
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Protein sequence | MTNTSSSPPA AGPLAGLKVV ELGQLIAGPF AARTLADFGA EVIKIEPPGA GDPLRTWRLL KDGTSVWWQV QSRNKRSLAL DLRQAEAQAV VRQLAAEADV LVENFRPGAM EGWGLGPGEL LAANPALVML RISGYGQTGP YRDRPGFGVV AEAMGGLRHL TGEPGRVPVR VGVSIGDTLA SLHGVIGVLM AMQHRHATVS AEYPKGRGQV VDVALYEAVF NCMESLLPEY SAFGAVREAA GSALPGIAPT NAYRCADGGY AIVAGNGDSI FRRLMACIGR PDLAADPSLA GNTGRVAQVE MLDAAIGEWT AARTVDEVLA ALDAAQVPAG RIYTIADIAA DSHYAARGML QQVHMPDGST LAVPGFVPKL SLTPASHRRS APALGADTDA VLKEIGLNAE QIAALHARGI VG
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